Job Description P24555 Confidence 65.19% Date Thu Jan 5 11:41:42 GMT 2012 Rank 393 Aligned Residues 240 % Identity 9% Template c3dasA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of the pqq-bound form of aldose sugar2 dehydrogenase (adh) from streptomyces coelicolor Resolution 1.60 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	.	.	.	.	.	.	.	.	Y	P	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	Y
Query Conservation																																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.													.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		G	L	A	P	L	P	G	G	D	L	L	V	S	S	R	D	E	A	.	.	.	.	.	T	I	T	R	V	D	A	K	T	G	R	K	T	E	L	G	E	V	P	G	V	S	P	S	G	E	G	G	L	L	G	I	A	L	S	P	D	Y	A	S	D	H	X	V	Y	A	Y	F	T	S	A	S	D	N	R	I	V
Template Known Secondary structure							T	T	S							T	T	T		.	.	.	.	.							T	T	T										T	T				B	T	T	B	S								T	T														S	S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		R	X	L	Y	D	E	K	K	P	S	G	E	Q	L	.	.	.	.	.	.	G	A	P	D	T	V	F	R	G	I	P	K	G	V	I	H	N	G	G	R	I	A	F	G	P	D	K	X	L	Y	A	G	T	G	E	S	G	D	T	G	L	S	Q	D	R	K	S	L	G	G	K	I	L	R	X	T	P	D	G	E
Template Known Secondary structure					B		T	T	S		T	T			B	.	.	.	.	.	.														S	S										T	T	S							B		T	T		G	G	G	T	T		T	T		S	T	T							T	T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.															300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	P	G	N	P	F	P	G	S	P	V	Y	S	Y	G	H	R	N	V	Q	G	L	A	W	D	D	K	Q	R	L	F	A	S	E	F	G	Q	D	T	W	D	E	L	N	A	I	K	P	G	D	N	Y	G	W	P	E	A	E	G	K	G	G	G	S	G	F	H	D	P	V	A	Q	W	S	T	D	E	A	S
Template Known Secondary structure		B		T	T		S	S	T	T						B			S	B								T	T										S	S	S									T	T		B			T	T	T			S	S				T	T					S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	G	I	A	Y	A	E	G	S	V	W	X	A	G	L	R	G	E	R	L	W	R	I	P	L	K	G	T	A	A	A	A	D	P	Q	A	F	L	E	G	E	Y	G	R	L	R	T	V	A	P	A	G	G	D	K	L	W	L	V	T	S	N	T
Template Known Secondary structure									T	T							S	T	T		S								T	T			S	S						S	T	T	T	S	S										T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions