Job Description P24555 Confidence 99.75% Date Thu Jan 5 11:41:42 GMT 2012 Rank 46 Aligned Residues 233 % Identity 15% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.															.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.	.	.		.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.										.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.										.
Query Sequence		S	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	.	.	.	F	S	R	L	S	L	L	D	R	.	G	F	V	Y
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.										.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.										.
Template Conservation
Template Sequence		V	F	S	F	D	V	L	I	D	R	R	I	N	L	L	S	R	V	Y	R	P	A	Y	A	D	Q	E	Q	P	P	S	I	L	D	L	E	K	P	V	D	G	D	I	V	P	V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V
Template Known Secondary structure											T	T	T	T											T	T		S	S				T	T	S	T	T					S	S	S										S	T	T	T	S			T	T	B															T	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.						.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																																											.	.	.	.	.																															.	.	.
Query SS confidence																																											.	.	.	.	.																															.	.	.
Query Sequence		A	I	V	H	V	R	G	G	G	E	L	G	Q	Q	W	Y	E	D	G	K	F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	L	.	.	.	.	.	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	.	.	.	F
Query Conservation																																											.	.	.	.	.																															.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.																															.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	V	N	Y	R	R	A	P	E	N	P	.	.	.	.	.	.	.	.	.	.	.	Y	P	C	A	Y	D	D	G	W	I	A	L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L	A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V
Template Known Secondary structure									T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	T	T															T		G	G	G			T	T	T	S	S									T															T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.												.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.		.	.	.	.	.	.	590	.	.	.	.	.														.	.	.	.					600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query SS confidence																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query Sequence		H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E	F	E	E	W	G	N	P	.	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	Y	D	.	.	.	.	N	V	T	A	Q	A	Y	P	H	L	L	V
Query Conservation																																				.													.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	.	.	.	.	.	.	.	.	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S	P	R	G	K	S	L	E	G	V	S	F	P	K	S	L	V
Template Known Secondary structure								S						S	S		.	.	.	.	.	.	.	.								T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T	S				T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.			.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		T	T	G	L	H	D	S	Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	.	.	S	G	R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L
Query Conservation																																														.	.
Alig confidence												.	.																.	.	.															.	.
Template Conservation												.	.																.	.	.
Template Sequence		V	V	A	G	L	D	L	I	R	D	.	.	W	Q	L	A	Y	A	E	G	L	K	K	A	G	Q	E	.	.	.	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V
Template Known Secondary structure					T	T	S	T	T			.	.												T	T			.	.	.							T	T			T	T	T	T	S	S	S		S
Template Predicted Secondary structure												.	.																.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions