Job Description P24555 Confidence 91.88% Date Thu Jan 5 11:41:42 GMT 2012 Rank 360 Aligned Residues 103 % Identity 7% Template c2xznR_ PDB info PDB header:ribosome Chain: R: PDB Molecule:rack1; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		129	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		M	G	G	M	A	I	.	.	.	.	.	.	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	.	.	.	.	.	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P
Query Conservation								.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.									.								.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																						.								.	.	.	.
Template Sequence		V	T	S	I	V	A	G	F	S	Q	K	E	N	E	D	S	P	V	L	I	.	S	G	S	R	D	K	T	.	.	.	.	V	M	I	W	K	L	Y	E	E	E	Q	N	G	Y	F	G	I	P	H	K	A	L	T	G	H	N	H	F	V	S	D	L	A	L	S	Q	E	N	C	F	A	I	S	S	S	W	D	K
Template Known Secondary structure											S	S	T	T								.				T	T	S		.	.	.	.								S	S			S	S	B	S											S	S									S	S	T	T							T	T	S
Template Predicted Secondary structure																						.								.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T
Query Conservation
Alig confidence			.	.	.	.	.	.																						.	.	.
Template Conservation			.	.	.	.	.	.																						.	.	.
Template Sequence		T	.	.	.	.	.	.	L	R	L	W	D	L	R	T	G	T	T	Y	K	R	F	V	G	H	Q	S	E	.	.	.	V	Y	S	V	A	F	S	P	D	N	R	Q	I	L	S	A	G	A	E	R	E
Template Known Secondary structure			.	.	.	.	.	.						T	T	S	S											S		.	.	.								S	S	T	T							T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.																						.	.	.
Template SS confidence
		99							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions