Job Description P24555 Confidence 99.15% Date Thu Jan 5 11:41:42 GMT 2012 Rank 137 Aligned Residues 196 % Identity 16% Template c2r8bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2452; PDBTitle: the crystal structure of the protein atu2452 of unknown function from2 agrobacterium tumefaciens str. c58 Resolution 2.56 Å

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		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.					.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H	R	K	H	F	R	K	G	H	N	P	L	L	V	Y	G	Y	G	S	Y	G	A	S	I	D	A	D	F	S	F	S	R	L	S	L	L	D	R	G	F	V	Y	A	I	V	H	V	R	G	G	G	E	.	.	.	.	L	G	Q	Q	W	Y	E	D	G	K
Query Conservation																																																																				.	.	.	.
Alig confidence													.	.	.	.	.	.																							.	.																										.	.	.	.
Template Conservation													.	.	.	.	.	.																							.	.
Template Sequence		P	X	T	K	D	S	Y	F	H	K	S	.	.	.	.	.	.	R	A	G	V	A	G	A	P	L	F	V	L	L	H	G	T	G	G	D	E	N	Q	.	.	F	F	D	F	G	A	R	L	L	P	Q	A	T	I	L	S	P	V	G	D	V	S	E	H	G	A	A	R	F	F	R	R	T	G	E	G	V	Y	D
Template Known Secondary structure				S	T	T	S	S					.	.	.	.	.	.					T	T	S									T	T						.	.									S	T	T	S								S				T	T				S	S		B		G	G	G		B
Template Predicted Secondary structure													.	.	.	.	.	.																							.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	K	K	K	N	T	F	N	D	Y	L	D	A	C	D	A	L	L	K	L	G	Y	G	S	P	S	L	C	Y	A	M	G	G	S	A	G	G	M	L	M	G	V	A	I	N	Q	R	P	E	L	F	H	G	V	I	A	Q	V	P	F	V	D	V	V	T	T	M	L	D	E	S	I	P	L	T	T	G	E	F
Query Conservation
Alig confidence																							.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	V	D	L	E	R	A	T	G	K	X	A	D	F	I	K	A	N	R	E	H	.	.	Y	Q	A	G	P	V	I	G	L	G	F	S	N	G	A	N	I	L	A	N	V	L	I	E	Q	P	E	L	F	D	A	A	V	L	X	H	P	L	I	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							.	.		T			S							T													S	T	T	T		S						S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	W	G	N	P	Q	D	P	Q	Y	Y	E	Y	M	K	S	Y	S	P	Y	D	N	V	T	A	Q	A	Y	P	H	L	L	V	T	T	G	L	H	D	S	Q	V	Q	Y	W	E	P	A	K	W	V	A	K	L	R	E	L	K	T	D	D	H	L	L	L	L	C	T	D	M	D	S	G	H	G	G	K	S	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																															.	.	.								.							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																															.	.	.								.							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	K	I	S	P	A	K	P	T	R	R	.	V	L	I	T	A	G	E	R	D	P	I	C	P	V	Q	L	T	K	A	L	E	E	S	L	K	A	Q	G	G	T	.	.	.	V	E	T	V	W	H	P	.	G	G	H	E	I	R	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T			.							T	T		T	T	S																S	S		.	.	.							S	.	S		S	S			.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																															.	.	.								.							.	.
Template SS confidence
																				177	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.		.	.	.	.	230	.
		658	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	S	Y	E	G	V	A	M	E	Y	A	F	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	G	E	I	D	A	V	R	G	F	L
Template Known Secondary structure		.	.	.	.
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						232	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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