Job Description P24555 Confidence 98.18% Date Thu Jan 5 11:41:42 GMT 2012 Rank 257 Aligned Residues 268 % Identity 10% Template c2ojhA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu1656/agr_c_3050; PDBTitle: the structure of putative tolb from agrobacterium tumefaciens Resolution 1.85 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	.	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S
Query Conservation																					.
Alig confidence																					.																										.	.	.	.	.	.	.										.
Template Conservation																																															.	.	.	.	.	.	.										.
Template Sequence		G	S	X	R	S	S	I	E	I	F	N	I	R	T	R	K	X	R	V	V	W	Q	T	P	E	L	F	E	A	P	N	W	S	P	D	G	K	Y	L	L	L	N	S	E	G	.	.	.	.	.	.	.	L	L	Y	R	L	S	L	A	G	.	D	P	S	P	E	K	V	D	T	G	F	A	T	I	C	N	N	D
Template Known Secondary structure													T	T	T	T									S	S									T	T	S	S							T	T	.	.	.	.	.	.	.							S	S	S	.			S							T	T				B		S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.										.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E
Query Conservation
Alig confidence																					.																																												.	.
Template Conservation																					.																																												.	.
Template Sequence		H	G	I	S	P	D	G	A	L	Y	A	I	S	D	K	V	E	F	G	.	K	S	A	I	Y	L	L	P	S	T	G	G	T	P	R	L	X	T	K	N	L	P	S	Y	W	H	G	W	S	P	D	G	K	S	F	T	Y	C	G	I	R	D	Q	.	.	V	F	D	I	Y	S	X	D	I	D	S	G	V	E	T
Template Known Secondary structure						T	T	S	S								T	T	T	S	.	S								T	T									S	S	S	S								T	T	S	S									T	T	.	.									T	T	T
Template Predicted Secondary structure																					.																																												.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																	.	.	.																									.	.	.	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		R	L	T	H	G	E	G	R	N	D	G	P	D	Y	S	P	D	G	R	W	I	Y	F	N	S	S	R	T	G	Q	X	Q	I	W	R	V	R	V	D	G	S	S	V	E	R	I	T	.	.	.	D	S	A	Y	G	D	W	F	P	H	P	S	P	S	G	D	K	V	V	F	V	S	Y	D	A	D	V	F	D	H
Template Known Secondary structure						S	S	S									T	T	S	S								T	T	S	S								T	T	S	S							.	.	.			S										T	T	S	S									T	T			S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
			382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V	P	G	F	Y	A	A	N	Y	R	S	E	H	L	W	I	V	A	R	D	G	V	E	V	P	V	S	L	V	Y	H
Query Conservation		.
Alig confidence		.																																				.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		P	R	D	L	D	V	R	V	Q	L	X	D	X	D	G	G	N	V	E	T	L	F	D	L	F	G	G	Q	G	T	X	N	S	P	N	W	.	.	.	.	.	.	S	P	D	G	D	E	F	A	Y	V	R	Y	F	P
Template Known Secondary structure			S	S										T	T	S		S										S	T	T	T	S		S			B	.	.	.	.	.	.		T	T	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions