Job Description P24555 Confidence 97.82% Date Thu Jan 5 11:41:42 GMT 2012 Rank 273 Aligned Residues 221 % Identity 10% Template c2oajA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:protein sni1; PDBTitle: crystal structure of sro7 from s. cerevisiae Resolution 2.40 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	L	D	A	N	K	R	A	A	H	S	E	F	Y	S	M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	.	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H
Query Conservation																																																									.
Alig confidence																																					.	.	.	.	.																.																.
Template Conservation																																					.	.	.	.	.																																.
Template Sequence		I	F	S	L	A	E	T	N	K	Y	G	M	S	S	K	P	I	A	A	A	F	D	F	T	Q	N	L	L	A	I	A	T	V	T	G	.	.	.	.	.	E	V	H	I	Y	G	Q	Q	Q	V	E	V	V	I	K	L	E	D	R	S	A	I	K	E	M	R	F	V	K	G	I	.	Y	L	V	V	I	N	A	K
Template Known Secondary structure		T												S	S									T	T	T	T							T	T	S	.	.	.	.	.							S	T	T								S	S											T	T	T	.							T	T
Template Predicted Secondary structure																																					.	.	.	.	.																																.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.																					.	.	.	.																						.	.	.																		.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																					.	.	.	.																						.	.	.
Template Sequence		D	T	.	.	.	.	.	.	V	Y	V	L	S	L	Y	S	Q	K	V	L	T	T	V	F	V	P	G	K	.	.	.	.	I	T	S	I	D	T	D	A	S	L	D	W	M	L	I	G	L	Q	N	G	S	.	.	.	M	I	V	Y	D	I	D	R	D	Q	L	S	S	F	K	L	D	N	L	Q	K	S	S	F
Template Known Secondary structure				.	.	.	.	.	.						T	T	T		S								S	S		.	.	.	.								T	T		S							T	T	S		.	.	.						T	T	T	T															T
Template Predicted Secondary structure				.	.	.	.	.	.																					.	.	.	.																						.	.	.
Template SS confidence
		139	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
						266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.																			.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	E	N	I	M	L	E	G	F	T	L
Query Conservation		.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		F	P	A	A	R	L	S	P	I	V	S	I	Q	W	N	P	R	D	I	G	T	V	L	I	S	Y	E	Y	V	.	.	.	.	T	L	T	Y	S	L	V	E	N	E	I	K	Q	S	F	I	Y	E	L	P	P	F	A	P	G	G	D	F	S	E	K	T	N	E	K	R	T	P	K	V	I	Q	S	L	Y	H	P
Template Known Secondary structure			S	S	S												T	T										S	S		.	.	.	.						T	T	T	T										B		T	T				S	T	T				T	T	S		B											T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y
Query Conservation
Alig confidence															.	.	.
Template Conservation															.	.	.
Template Sequence		N	S	L	H	I	I	T	I	H	E	D	N	S	.	.	.	L	V	F	W	D	A	N	S	G	H	M	I	M	A	R	T	V	F	E	T	E
Template Known Secondary structure		T	S	S							T	T			.	.	.						T	T	T									S	S		S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions