Return to main results Retrieve Phyre Job Id

Job DescriptionP24555
Confidence99.55%DateThu Jan 5 11:41:42 GMT 2012
Rank88Aligned Residues253
% Identity14%Templatec2hdwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical protein pa2218; PDBTitle: crystal structure of hypothetical protein pa2218 from pseudomonas2 aeruginosa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   410.........420.........430.........440.........450.........460.........470.........480.........
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  YAANYRSEHLWIVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG
Query Conservation               
 

  

  
  
         
 

  



       
      
   
  
   
 


 
 
Alig confidence 
































.
















.






















...

Template Conservation      
    
   
 

  
      
      .  
 

  

       .     
  

  
  
   
 

... 
Template Sequence  LSAKVEHRKVTFANRYGITLAADLYLPKNRGGD. RLPAIVIGGPFGAVKEQ. SSGLYAQTMAERGFVTLAFDPSY. . . TG
Template Known Secondary structure 

TT
TTS
TT

SS.


TT

TTT.TT


TT...ST
Template Predicted Secondary structure 















.







.






...

Template SS confidence 















































































   62.......70.........80.........90.... .....100.........110. ........120.........130.... ..
 
   490.........500.........510.........520.........530.........540.........550.........560.........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  QQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDES
Query Conservation    
  
           
 

    

  
  
  

 
 
 
 

 
        



 
 
   

 
         
Alig confidence 















































































Template Conservation   
                                      
 
 
   
   
                           
Template Sequence  ESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYND
Template Known Secondary structure  TS

SSSS


TTSTTT
TTS


TGGG
Template Predicted Secondary structure 














































Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   570......... 580.........590......
Predicted Secondary structure 



.....................................................






Query SS confidence 









. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















Query Sequence  IPLTTGEFEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WGNPQDPQYYEYMKSYS
Query Conservation           
..................................................... 
 
            
Alig confidence 









.....................................................
















Template Conservation                                                                                  
Template Sequence  SVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMP
Template Known Secondary structure 


SS

B
S
TT


SS

TSTTT

TT
TTTT


BTTTTTS
Template Predicted Secondary structure 














































Template SS confidence 















































































   217..220.........230.........240.........250.........260.........270.........280.........290......
 
   597..600.........610.........620.........630.........640.........650.........660.........670......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLVALA
Query Conservation 
   
     
  

  
  
 

      
    
         
 
      


            
    

    
Alig confidence 



























.....














...















.











Template Conservation             
 


 
  
   
   .....           
   ... 
 

           .   
  

  

Template Sequence  ILTYIKEISPRPILLIHGERAHSRYFSE. . . . . TAYAAAAEPKELLIV. . . PGASHVDLYDRLDRIP. FDRIAGFFDEHL
Template Known Secondary structure  S
TTGGGSTTS
TT
TT.....S
SS...TT

ST
TTTS
.
Template Predicted Secondary structure 











.....




...







.
Template SS confidence 















































































   297..300.........310.........320.... .....330......... 340.........350..... ....360.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions