Job Description P24555 Confidence 32.65% Date Thu Jan 5 11:41:42 GMT 2012 Rank 437 Aligned Residues 273 % Identity 11% Template c2gnqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd-repeat protein 5; PDBTitle: structure of wdr5 Resolution 1.80 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	.	.	E	L	L	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I
Query Conservation																																									.	.
Alig confidence																						.	.	.	.	.															.	.																												.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																																												.	.	.	.	.	.
Template Sequence		V	S	S	V	K	F	S	P	N	G	E	W	L	A	S	S	S	A	D	K	.	.	.	.	.	L	I	K	I	W	G	A	Y	D	G	K	F	E	K	T	I	S	G	H	K	L	G	I	S	D	V	A	W	S	S	D	S	N	L	L	V	S	A	S	D	D	K	T	.	.	.	.	.	.	L	K	I	W	D	V
Template Known Secondary structure									T	T	S	S							T	T	S	.	.	.	.	.							T	T	T											S	S									T	T	S	S							T	T	S		.	.	.	.	.	.						T
Template Predicted Secondary structure																						.	.	.	.	.																																												.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S
Query Conservation
Alig confidence		.	.	.																																					.	.	.
Template Conservation		.	.	.																																					.	.	.
Template Sequence		.	.	.	S	S	G	K	C	L	K	T	L	K	G	H	S	N	Y	V	F	C	C	N	F	N	P	Q	S	N	L	I	V	S	G	S	F	D	E	S	.	.	.	V	R	I	W	D	V	K	T	G	K	C	L	K	T	L	P	A	H	S	D	P	V	S	A	V	H	F	N	R	D	G	S	L	I	V	S	S	S
Template Known Secondary structure		.	.	.	T	T											S	S									S	S	S	S							T	T	S		.	.	.						T	T	T											S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.																																					.	.	.
Template SS confidence
					117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	Y
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		Y	D	G	L	.	.	.	.	.	C	R	I	W	D	T	A	S	G	Q	C	L	K	T	L	I	D	D	D	N	P	P	V	S	F	V	K	F	S	P	N	G	K	Y	I	L	A	A	T	L	D	N	T	L	K	L	W	D	Y	S	K	G	K	C	L	K	T	Y	T	G	H	K	N	E	K	Y	C	I	F	A	N
Template Known Secondary structure		T	T	S		.	.	.	.	.						T	T	T										S	S											T	T	S	S							T	T	T							T	T	T	T								S	S			S	S	S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		191	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.				.	.	.
Predicted Secondary structure																																																				.									.	.	.
Query SS confidence																																																				.									.	.	.
Query Sequence		N	P	E	P	E	T	A	R	L	R	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V	P	G	F	Y	A	A	N	Y	R	S	.	E	H	L	W	I	V	A	R	.	.	.	D	G	V
Query Conservation																																																				.									.	.	.
Alig confidence																	.	.	.	.																																.									.	.	.
Template Conservation																	.	.	.	.
Template Sequence		F	S	V	T	G	G	K	W	I	V	S	G	S	E	D	.	.	.	.	N	L	V	Y	I	W	N	L	Q	T	K	E	I	V	Q	K	L	Q	G	H	T	D	V	V	I	S	T	A	C	H	P	T	E	N	I	I	A	S	A	A	L	E	N	D	K	T
Template Known Secondary structure					S	S	S								T	T	.	.	.	.	S							T	T	T											S	S									S	S	S	S								T	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions