Job Description P24555 Confidence 97.83% Date Thu Jan 5 11:41:42 GMT 2012 Rank 271 Aligned Residues 272 % Identity 8% Template c1qniE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		S	M	G	G	M	A	I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	.	.	.	D	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	.	.	.	.	.	.	.	.
Query Conservation																																													.	.	.																											.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																		.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		H	I	S	M	T	D	G	R	Y	D	G	K	Y	L	F	I	N	D	K	A	N	T	.	.	.	.	R	V	A	R	I	R	L	D	I	M	K	T	D	K	I	T	H	I	P	N	V	Q	A	I	H	G	L	R	L	Q	K	V	P	K	T	N	Y	V	F	C	N	A	E	F	V	I	P	Q	P	N	D	G	T	D
Template Known Secondary structure							T	T												T	T	T	T	.	.	.	.							T	T	T	T									T	T												S	S	B										S				S	S		S	S	S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
							197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.														.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		F	S	L	D	N	S	Y	T	M	F	T	A	I	D	A	E	T	M	.	.	.	.	D	V	A	W	Q	V	I	V	D	G	N	L	D	N	T	D	A	D	Y	T	G	K	Y	A	T	S	T	C	Y	N	S	E	R	A	V	D	L	A	G	T	M	R	N	D	R	D	W	V	V	V	F	N	V	E	R	I	A	A
Template Known Secondary structure				G	G	G										T	T	T		.	.	.	.									S	S									S	S	S	S							S		T	T			S	S					T		S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
													246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	M	.	.	.	.	.	.	.	.	R	D	E	Q	Q	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																			.																					.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		A	V	K	A	G	N	F	K	T	I	G	D	S	K	V	P	V	V	D	G	R	G	E	S	E	F	T	R	Y	I	P	V	P	K	N	P	H	G	L	N	T	S	P	D	G	.	K	Y	F	I	A	N	G	K	L	S	P	T	V	S	V	I	A	I	D	K	L	D	D	L	F	E	D	K	I	E	L	R	D	T
Template Known Secondary structure					T	T			B			T	T									S	S	S		S	S								S	S								T	T	S	.								T	T	S	S	B						G	G	G					T	T	T	S	S		G	G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.											.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	.	.	.	.	.	.	.	.	.	.	K	T	R	E	V	I	G	I	A	F	D	D	P	A	Y	V	T	W	I	A	.	Y	N	P	E	P	E	T	A	R	L
Query Conservation																																									.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		I	V	A	E	P	E	L	G	L	G	P	L	H	T	T	F	D	G	R	G	N	A	Y	T	T	L	F	I	D	S	Q	V	C	K	W	N	I	A	D	A	I	K	H	Y	N	G	D	R	V	N	Y	I	R	Q	K	L	D	V	Q	Y	Q	P	G	H	N	H	A	S	L	T	E	S	R	D	A	D	G	K	W	L
Template Known Secondary structure							B			S									S	S	S							T	T	T	T																T													S	S								T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		376										.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	.	Y	G	Y	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V	P	G
Query Conservation			.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	L	S	K	F	S	K	D	R	F	L	P	V	G	P	L	H	P	E	N	D	Q	L	I	D	I	S	G	E	E	M	K	L	V	H	D	G	P	T	Y	A
Template Known Secondary structure						S			T	T	S	S				S	S	S											S	S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions