Job Description P24555 Confidence 98.76% Date Thu Jan 5 11:41:42 GMT 2012 Rank 185 Aligned Residues 268 % Identity 10% Template c1nnoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrite reductase; PDBTitle: conformational changes occurring upon no binding in nitrite2 reductase from pseudomonas aeruginosa Resolution 2.65 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.														.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	E	P	S	F	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																			.	.	.	.																																																						.	.	.	.	.
Template Sequence		K	G	Y	E	D	R	Y	T	I	A	G	A	Y	W	P	P	Q	.	.	.	.	F	A	I	M	D	G	E	T	L	E	P	K	Q	I	V	S	T	R	G	M	T	V	D	T	Q	T	Y	H	P	E	P	R	V	A	A	I	I	A	S	H	E	H	P	E	F	I	V	N	V	K	E	T	G	.	.	.	.	.	K
Template Known Secondary structure		T	T		T	T	S									T	T		.	.	.	.						T	T	T														S	S	S					S											S	S	S	S							T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.																																																						.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		V	W	R	H	A	I	G	T	P	A	S	Q	D	K	L	I	Y	E	E	K	D	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	.	.	.	L	P	R	R	K	D	H	E	Y	S	L	D	H
Query Conservation																																																																		.	.	.
Alig confidence																					.	.																									.	.																		.	.	.
Template Conservation																					.	.																									.	.
Template Sequence		V	L	L	V	N	Y	K	D	I	D	N	L	T	V	T	S	I	G	A	.	.	A	P	F	L	H	D	G	G	W	D	S	S	H	R	Y	F	M	T	A	A	N	N	S	N	.	.	K	V	A	V	I	D	S	K	D	R	R	L	S	A	L	V	D	V	G	K	T	P	H	P	G	R	G	A	N	F	V	H	P
Template Known Secondary structure								T	T	T	T	S									.	.		S	S								T	T	S								G	G	G	T	.	.							T	T	T	T									S	S	S	B			T	T							T
Template Predicted Secondary structure																					.	.																									.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																																							.	.	.	.
Query SS confidence																								.	.	.	.	.																																							.	.	.	.
Query Sequence		Y	Q	H	R	F	Y	L	R	S	N	R	H	G	K	N	F	G	L	Y	R	T	R	.	.	.	.	.	M	R	D	E	Q	Q	W	E	E	L	I	P	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	.	.	.	.	T	S	L	R	Q	I	N	R	K	T	R
Query Conservation																								.	.	.	.	.																																							.	.	.	.
Alig confidence																								.	.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		K	Y	G	P	V	W	S	T	S	H	L	G	D	G	S	I	S	L	I	G	T	D	P	K	N	H	P	Q	Y	A	W	K	K	V	A	E	L	Q	G	Q	G	G	G	S	L	F	I	K	T	H	P	K	S	S	H	L	Y	V	D	T	T	F	N	P	D	A	R	I	S	Q	S	V	A	V	F	D	L	K	N	L
Template Known Secondary structure		T	T								B	S	S	S	S									T	T	T		T	T	T	B	T	S								S		S									T	T									T	T		S	S					T							T	T		T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.								.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																							.
Query SS confidence											.	.	.	.	.	.	.																							.
Query Sequence		E	V	I	G	I	A	F	D	D	.	.	.	.	.	.	.	P	A	Y	V	T	W	I	A	Y	N	P	E	P	E	T	A	R	L	R	Y	G	Y	.	S	S	M	T	T	P	D	T	L	F	E	L	D	M	D	T	G	E	R	R	V	L	K	Q	T	E	V	P	G	F	Y	A	A	N	Y
Query Conservation											.	.	.	.	.	.	.																							.
Alig confidence											.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		D	A	K	Y	Q	V	L	P	I	A	E	W	A	D	L	G	E	G	A	K	R	V	V	Q	P	E	Y	N	K	R	G	D	E	V	W	F	S	V	W	N	G	K	N	D	S	S	A	L	V	V	V	D	D	K	T	L	K	L	K	A	V	V	K	D	P	R	L	I	T	P	T	G	K	F
Template Known Secondary structure		T	S															S	S											S	S	S	S										T	T	S									T	T	T										T	T			S
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions