Job Description P24555 Confidence 38.28% Date Thu Jan 5 11:41:42 GMT 2012 Rank 422 Aligned Residues 198 % Identity 10% Template c1c9lA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:clathrin; PDBTitle: peptide-in-groove interactions link target proteins to the2 b-propeller of clathrin Resolution 2.90 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		P	D	N	T	I	M	A	L	A	E	D	F	L	S	R	R	Q	Y	G	I	R	F	R	N	L	E	T	G	N	W	Y	P	E	L	L	D	N	V	E	P	S	F	.	V	W	A	N	D	S	W	I	F	Y	Y	V	R	K	H	P	V	T	L	L	P	Y	Q	V	W	R	H	A	I	G	T	P	A	S	Q	D	K
Query Conservation																																												.
Alig confidence												.	.	.	.	.	.																											.											.	.	.	.	.	.	.	.														.
Template Conservation												.	.	.	.	.	.																																						.	.	.	.	.	.	.	.														.
Template Sequence		P	A	S	K	V	I	A	L	K	A	.	.	.	.	.	.	G	K	T	L	Q	I	F	N	I	E	M	K	S	K	M	K	A	H	T	M	T	D	D	V	T	F	W	K	W	I	S	L	N	T	V	A	L	.	.	.	.	.	.	.	.	V	T	D	N	A	V	Y	H	W	S	M	E	G	.	E	S	Q	P	V
Template Known Secondary structure		S	S	S	S							.	.	.	.	.	.	T	T							T	T	T	T									S	S									S	S	S					.	.	.	.	.	.	.	.			S	S								S	S	.	S
Template Predicted Secondary structure												.	.	.	.	.	.																																						.	.	.	.	.	.	.	.														.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.									.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.
		215	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.
Predicted Secondary structure									.	.	.																.																																														.	.	.	.
Query SS confidence									.	.	.																.																																														.	.	.	.
Query Sequence		L	I	Y	E	E	K	D	.	.	.	D	T	Y	Y	V	S	L	H	K	T	T	S	K	H	Y	.	V	V	I	H	L	A	S	A	T	T	S	E	V	R	L	L	D	A	E	M	A	D	A	E	P	F	V	F	L	P	R	R	K	D	H	E	Y	S	L	D	H	Y	Q	H	R	.	.	.	.	F	Y	L	R	S
Query Conservation									.	.	.																.																																														.	.	.	.
Alig confidence									.	.	.																.																																														.	.	.	.
Template Conservation
Template Sequence		K	M	F	D	R	H	S	S	L	A	G	C	Q	I	I	N	Y	R	T	D	A	K	Q	K	W	L	L	L	T	G	I	S	A	Q	Q	N	R	V	V	G	A	M	Q	L	Y	S	V	D	R	K	V	S	Q	P	I	E	G	H	A	A	S	F	A	Q	F	K	M	E	G	N	A	E	E	S	T	L	F	C	F	A
Template Known Secondary structure								G	G	G	T	T										T	T	S												T	T											T	T	T	T								S										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	H	G	K	N	F	G	L	Y	R	T	R	M	R	D	E	Q	Q	W	E	E	L	I	P	.	.	.	.	.	.	.	.	.	.	.	P	R	E	N	I	M	L	E	G	F	T	L	F	T	D	W	L	V	V	E	E	R	Q	R	G	L	T	S	L	R	Q	I	N	R	K	T	R	E	V
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																																																																.	.
Template Sequence		V	R	G	Q	A	G	G	K	L	H	I	I	E	V	G	T	P	P	T	G	N	Q	P	F	P	K	K	A	V	D	V	F	F	P	P	E	A	Q	N	D	F	P	V	A	M	Q	I	S	E	K	H	D	V	V	F	L	I	T	K	Y	G	Y	.	.	I	H	L	Y	D	L	E	T	G	T	C
Template Known Secondary structure					T	T										S	S			T	T															T	T		S	S										T	T	T	T							T	T	S		.	.						T	T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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