Job Description P16430 Confidence 95.56% Date Thu Jan 5 11:35:06 GMT 2012 Rank 1 Aligned Residues 136 % Identity 15% Template c3rkoL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:nadh-quinone oxidoreductase subunit l; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	G	W	V	F	R	L	T	P	Y	V	M	V	G	V	M	L	T	I	A	T	A	L	P	V	V	T	V	G	S	P	L	P	Q	L	G	D	L	I	T	L	L	Y	L	F	A	I	A	R	F	F	F	A	I	S	G	L	D	T	G	S	P	F	T	A	I	G	A	S	R	E	A	M	L	G	V	L	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	E	E	G	Y	S	R	F	F	A	Y	T	N	L	F	I	A	S	M	V	V	L	V	L	.	.	.	.	.	.	.	.	.	.	A	D	N	L	L	L	M	Y	L	G	W	E	G	V	G	L	C	S	Y	L	L	I	G	F	Y	Y	T	D	P	K	N	G	A	A	A	M	K	A	F	V	V	T	R	V	G
Template Known Secondary structure		S	S		S																					T	.	.	.	.	.	.	.	.	.	.	B	S	B	S																			T	T	S	T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.											.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		E	P	M	L	L	L	G	L	W	V	A	A	Q	V	A	G	S	T	N	I	S	N	I	T	D	T	V	Y	H	W	P	L	S	Q	S	I	P	L	V	L	A	L	C	A	C	A	F	A	T	F	I	E	M	G	K	L	P	F	D	L	.	.	A	E	A	E	Q	E
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		D	V	F	L	A	F	A	L	F	I	L	Y	N	E	L	G	T	L	N	F	R	E	M	V	E	L	A	P	A	H	F	A	D	G	N	N	M	L	M	W	A	T	L	M	L	L	G	G	A	V	G	K	S	A	Q	L	P	L	Q	T	W	L	A	D	A	M	A	G
Template Known Secondary structure																T	S			B													T	T		S	S	S																	T		T	T	S	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions