Job Description P26459 Confidence 79.75% Date Thu Jan 5 11:42:55 GMT 2012 Rank 4 Aligned Residues 175 % Identity 17% Template d1ar1a_ SCOP info Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	P	L	T	L	G	L	I	F	L	L	A	I	M	E	T	I	Y	V	V	T	G	K	T	I	Y	R	D	M	T	R	F	W	G	K	L	F	G	I	N	F	A	L	G	V	A	T	G	L	T	M	E	F	Q	F	G	T	N	W	S	F	Y	S	N	Y	V	G	D	I	F	G	A	P	L	A	M	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	T	M	T	I	A	V	P	T	G	I	K	V	F	S	W	I	A	T	M	W	G	G	S	I	E	F	K	T	P	M	L	W	A	F	G	F	L	F	L	F	T	V	G	G	V	T	G	V	V	L	S	Q	A	P	L	D	R	V	Y	H	D	T	Y	Y	V	V	A	H	F	H	Y	V	M	S	L	G	A	V
Template Known Secondary structure							T																	S	S																														S								T	T	B												T	T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	F	F	L	E	S	T	F	V	G	L	F	F	F	G	W	Q	R	L	N	K	Y	Q	H	L	L	V	T	W	L	V	A	F	G	S	N	L	S	A	L	W	I	L	N	A	N	G	W	M	Q	Y	P	T	G	A	H	F	D	I	D	T	L	R	M	E	M	T	S	F	S	E	L	V	F	N	P	V	S	Q
Query Conservation
Alig confidence																		.																															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	I	F	A	G	V	Y	Y	W	I	G	K	M	S	G	.	R	Q	Y	P	E	W	A	G	Q	L	H	F	W	M	M	F	I	G	S	N	L	I	F	F	P	Q	H	F	L	G	.	R	Q	G	M	P	R	R	Y	I	D	Y	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	A	Y
Template Known Secondary structure																	S	.																								S							.		T	T		B	S	S		S				G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																		.																															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480																.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	F	V	H	T	V	M	A	G	Y	V	T	G	A	M	F	I	M	A	I	S	A	W	Y	L	L	R	G	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	N	N	I	S	S	I	G	A	Y	I	S	F	A	S	F	L	F	F	I	G	I	V	F	Y	T	L	F	A	G	K	R
Template Known Secondary structure																															S
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions