Job Description P26459 Confidence 96.67% Date Thu Jan 5 11:42:55 GMT 2012 Rank 1 Aligned Residues 188 % Identity 14% Template c3mk7K_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit n; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		F	V	P	L	T	L	G	L	I	F	L	L	A	I	M	E	T	I	Y	V	V	T	G	.	.	K	T	I	Y	R	D	M	T	R	F	W	G	K	L	F	G	I	N	F	A	L	G	V	A	T	G	L	T	M	E	F	Q	F	G	T	N	W	S	F	Y	S	N	Y	V	G	D	I	F	G	A	P	L	A	M	E
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		V	M	S	L	I	L	L	A	P	S	W	G	G	M	I	N	G	M	M	T	L	S	G	A	W	H	K	L	R	S	D	P	I	L	R	F	L	V	V	S	L	A	F	Y	G	M	S	T	F	E	G	P	M	M	A	I	K	T	V	N	A	L	S	H	Y	T	D	W	T	I	G	H	V	H	A	G	A	L	G	W
Template Known Secondary structure							T													G	G	G	T	T	G	G	G																													T	S								T	T	S														T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	L	M	A	F	F	L	E	S	T	F	V	G	L	F	F	F	G	W	Q	R	L	.	N	K	Y	Q	H	L	L	V	T	W	L	V	A	F	G	S	N	L	S	A	L	W	I	L	N	A	N	G	W	M	Q	Y	P	T	G	A	H	F	D	I	D	T	L	R	M	E	M	T	S	F	S	E	L	V	F	N	P
Query Conservation																								.
Alig confidence																								.																				.																									.	.	.
Template Conservation																																												.																									.	.	.
Template Sequence		V	A	M	V	S	I	G	A	L	Y	H	L	V	P	K	V	F	G	R	E	Q	M	H	S	I	G	L	I	N	T	H	F	W	L	A	T	I	G	T	V	L	Y	.	I	A	S	M	W	V	N	G	I	A	Q	G	L	M	W	R	A	I	N	D	D	G	T	L	.	.	.	T	Y	S	F	V	E	S	L	E	A
Template Known Secondary structure																		T	T		S	S		S		S																		.																		B		T	T	S	S	B	.	.	.	S	S
Template Predicted Secondary structure																																												.																									.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Q	V	K	F	V	H	T	V	M	A	G	Y	V	T	G	A	M	F	I	M	A	I	S	A	W	Y	L	L	R	G	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	P	G	F	V	V	R	M	I	G	G	A	I	F	F	A	G	M	L	V	M	A	Y	N	T	W	R	T	V	Q	A	A	K	P
Template Known Secondary structure		T																															S		S	S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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