 |
Job Description | P0AEF8 | Confidence | 3.51% | Date | Thu Jan 5 11:23:12 GMT 2012 |
Rank | 90 | Aligned Residues | 36 |
% Identity | 14% | Template | d1tdpa_ |
SCOP info | Bromodomain-like
| Bacteriocin immunity protein-like
| Carnobacteriocin B2 immunity protein
|
Resolution | UNK |
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | T | A | R | A | K | G | L | T | R | M | R | V | I | I | V | H | A | L | R | N | A | M | L | P | V | V | T | V | I | G | L | Q | V | G |
Query Conservation |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|   |
|   |   |   |
|   |   |
|
|   |
Template Sequence |   |
V | I | S | L | L | S | R | G | I | S | S | Y | Y | L | S | H | K | R | I | I | P | S | S | M | L | T | I | Y | T | Q | I | Q | K | D | I | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
| T | T | S |
|
|
|
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|