Job Description P0AEF8 Confidence 3.95% Date Thu Jan 5 11:23:12 GMT 2012 Rank 69 Aligned Residues 35 % Identity 9% Template c2iykB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the upf2-interacting domain of2 nonsense mediated mrna decay factor upf1 Resolution 2.95 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	V	H	M	I	P	G	D	P	V	M	I	M	A	G	E	R	G	I	S	P	E	R	H	A	Q	L	L	A	E	L	G	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	S	W	L	V	K	I	P	S	E	Q	E	Q	L	R	A	R	Q	I	T	A	Q	Q	I	N	K	L	E	E	L	W	K	E	N
Template Known Secondary structure				T	T	T	S											S																	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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