Job Description P0AEF8 Confidence 3.43% Date Thu Jan 5 11:23:12 GMT 2012 Rank 92 Aligned Residues 75 % Identity 19% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	R	G	I	S	P	E	R	H	A	Q	L	L	A	E	L	G	L	D	K	P	M	W	Q	Q	Y	L	H	Y	I	W	G	V	M	H	G	D	L	G	I	S	M	K	S	R	I	P	V	W	E	E	F	V	P	R	F	Q	A	T	L	.	E	L	G	V	C	A	M	I	F	A	T	A	V	G	I	P	V	G	V
Query Conservation																																																														.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.															.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		R	V	G	L	T	S	E	E	V	V	Q	R	R	R	K	Y	G	L	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	E	E	K	E	N	H	F	L	K	F	L	G	F	F	V	G	P	I	Q	F	V	M	E	G	A	A	V	L	A	A	G	L	E	.	.	.	.	.
Template Known Secondary structure							S										T	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S					T																			T	T		S	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	V	K	R	G	S	I	F	D	H	T	A	V	G	L	A	L	T	G	Y	S	M	P	I	F	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	W	V	D	F	G	V	I	C	G	L	L	L	L	N	A	V	V	G	F	V
Template Known Secondary structure		.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions