 |
| Job Description | P75719 | | Confidence | 3.31% | Date | Wed Jan 25 15:21:02 GMT 2012 |
| Rank | 41 | Aligned Residues | 18 |
| % Identity | 28% | Template | c2gofA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:vpu protein; |
PDBTitle: three-dimensional structure of the trans-membrane domain of2 vpu from hiv-1 in aligned phospholipid bicelles
|
| Resolution | UNK |
|
| | |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | I | I | S | A | L | I | I | C | I | I | V | S | L | S | W | A | V |
| Query Conservation | |
| |
| | |
|
|
| |
|
|
| |
| |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence | |
A | I | V | A | L | V | V | A | I | I | I | A | I | V | V | W | S | I |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
