Return to main results Retrieve Phyre Job Id

Job DescriptionP22333
Confidence95.21%DateThu Jan 5 11:38:52 GMT 2012
Rank109Aligned Residues232
% Identity13%Templated1k1da2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain
Resolution3.01

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  AFENIEDAARHGLHYVELRFSPGYMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAH
Query Conservation      
      

 
 
 
  
            
                 
    
    
    
            
Alig confidence 























........





























.
















Template Conservation    
   

  





  

    ........                              .                 
Template Sequence  FESGTIAAAFGGTTTIIDFCLTNK. . . . . . . . GEPLKKAIETWHNKANGKAVIDYGFHLMIS. EITDDVLEELPKVLEEE
Template Known Secondary structure  TT


T........TS
TTT
SS

S.


SS
Template Predicted Secondary structure 









........








.




Template SS confidence 















































































   74.....80.........90....... ..100.........110.........120....... ..130.........140....
 
   160.........170.........180.........190......... 200........
Predicted Secondary structure 


















...............................



Query SS confidence 







































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .








Query Sequence  RDQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EAAGPESIW
Query Conservation     





   
              

        
 
...............................
        
Alig confidence 







































...............................








Template Conservation                  
   
   
      
  
  
 
               
           
   
  

    
Template Sequence  GITSLVFMAYKNVFQADDGTLYCTLLAAKELGALVMVHAENGDVIDYLTKKALADGNTDPIYHALTRPPELEGEATGRAC
Template Known Secondary structure 


B

BSSSTTTTB

T
BB


TT

STTS
Template Predicted Secondary structure 




























Template SS confidence 















































































   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   209210.........220.........230......... 240.........250.........260 ........
Predicted Secondary structure 









..












..................
Query SS confidence 






























. .




















. . . . . . . . . . . . . . . . . .







Query Sequence  QAIRELGAERIGHGVKAIEDRALMDFLAEQQ. . IGIESCLTSNIQTSTVAELAA. . . . . . . . . . . . . . . . . . HPLKTFLE
Query Conservation       
   

 

            
    ..
 
  

 

  
        ..................


  
  
Alig confidence 






























..




















..................







Template Conservation   

   
   

 



    
 
  

  
  
  
  
  
                    



   
   
   
 
Template Sequence  QLTELAGSQLYVVHVTCAQAVEKIAEARNKGLDVWGETCPQYLVLDQSYLEKPNFEGAKYVWSPPLREKWHQEVLWNALK
Template Known Secondary structure  T

S

STT



GGGGTSSTTGGGGG

SS



TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   269270........ .280.... .....290.........300......... 310.........320
Predicted Secondary structure 




....................





..





.



Query SS confidence 









. . . . . . . . . . . . . . . . . . . .





. .
























.










Query Sequence  HGIRASINTD. . . . . . . . . . . . . . . . . . . . DPGVQG. . VDIIHEYTVAAPAAGLSREQIRQAQ. INGLEMAFLSA
Query Conservation   

 
 
 

....................
     ..
 
  
   
     
    
  
 . 
     
   
Alig confidence 









....................





..
























.










Template Conservation   
 

 
 


 
     
             

 
 
  
  
    
    


   
   
 


  


  
Template Sequence  NGQLQTLGSDQCSFDFKGQKELGRGDFTKIPNGGPIIEDRVSILFSEGVKKGRITLNQFVDIVSTRIAKLFGLFP
Template Known Secondary structure  TSS



B



TTTTGGGGSS
GGGS


B

TTTTGGGTSS
TTT
TT
Template Predicted Secondary structure 

































Template SS confidence 










































































   306...310.........320.........330.........340.........350.........360.........370.........380
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions