Job Description P22333 Confidence 99.20% Date Thu Jan 5 11:38:52 GMT 2012 Rank 35 Aligned Residues 265 % Identity 14% Template c3v7pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase family protein; PDBTitle: crystal structure of amidohydrolase nis_0429 (target efi-500396) from2 nitratiruptor sp. sb155-2 Resolution 1.35 Å

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		2	.	.	.					.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.			.
Query SS confidence						.	.	.	.			.
Query Sequence		I	D	T	T	.	.	.	.	L	P	.	L	T	D	I	H	R	H	L	D	G	N	I	R	P	Q	T	I	L	E	L	G	R	Q	Y	N	I	S	L	P	A	Q	S	L	E	T	L	I	P	H	V	Q	V	I	A	N	E	P	D	L	V	S	F	L	T	K	L	D	W	G	V	K	V	L	A	S	L	D	A	C
Query Conservation						.	.	.	.			.
Alig confidence						.	.	.	.			.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		E	H	D	E	N	S	L	L	L	P	G	F	A	N	P	H	L	H	L	E	F	S	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	T	L	Q	Y	G	D	F	I	P	W	L	Y	S	V	I	R	H	R	.	E	D	L	L	P	L	C	D
Template Known Secondary structure																				G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S			S	S													.							S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.																												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		R	R	V	A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	.	.	.	.	.	.	.	E	A	A	C
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	C	L	E	Q	T	L	S	S	I	I	Q	T	G	T	T	A	I	G	A	I	S	S	Y	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Q	A	C	I	D	S	A	L	K	V	V	Y	F	N	E	V	I	G	S	N	A	A	T	A	D	V	M	Y	A	S	F	L
Template Known Secondary structure															T	T									S	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							B	S	S										B			G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																										.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	E	L	E	A	F	L	A	H	R	D	Q	I	T	A	L	D	L	A	G	D	E	L	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	F	H	Q	S	K	K	H	E	N	E	R	F	K	A	A	V	A	I	H	S	P	Y	S	V	H	Y	I	L	A	K	R	A	L	D	I	A	K	K	Y	G	S	L	V	S	V	H	F	M	E	S	R	A	E	R	E	W	L	D	K	G	S	G	E	F	A	K	F	F	K	E	F	L	N	Q	T	R	P	V
Template Known Secondary structure									T	T		B	T	T										T	T	T	B																T								S		S										S		S										T				S		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	I	E	D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G
Query Conservation
Alig confidence																																																				.	.	.	.						.	.
Template Conservation																																																				.	.	.	.						.	.
Template Sequence		N	D	T	K	S	F	L	E	L	F	K	E	L	H	T	L	F	V	H	M	V	W	A	N	E	E	E	I	Q	T	I	A	S	Y	N	A	H	I	I	H	C	P	I	S	N	R	L	L	G	N	.	.	.	.	G	V	L	D	L	.	.	E	K	I	K	S	I	P	Y	A	I	A	T	D	G	L	S	S	N	Y
Template Known Secondary structure		S								T	T	T	T	S								T	T												S														T	T		.	.	.	.					T	.	.	T	T	T	T	T	S									T	T	S		S
Template Predicted Secondary structure																																																				.	.	.	.						.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		285		.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.														.	.	.	.	.							.
Query SS confidence			.														.	.	.	.	.							.
Query Sequence		V	.	D	I	I	H	E	Y	T	V	A	A	P	A	A	.	.	.	.	.	G	L	S	R	E	Q	.	I	R	Q	A	Q	I	N	G	L	E	M	A	F	L	S
Query Conservation			.														.	.	.	.	.							.
Alig confidence			.														.	.	.	.	.							.
Template Conservation
Template Sequence		S	L	N	M	Y	E	E	L	K	A	A	L	F	V	H	P	N	K	E	A	T	T	F	A	K	E	L	I	I	R	A	T	K	A	G	Y	D	A	L	G	F	E
Template Known Secondary structure																S	T	T	S														T								T		S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions