Job Description P22333 Confidence 87.51% Date Thu Jan 5 11:38:52 GMT 2012 Rank 122 Aligned Residues 225 % Identity 10% Template c3pnuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F	L	A	H	R	D	Q	I	T
Query Conservation
Alig confidence																.	.	.	.	.																						.	.
Template Conservation																.	.	.	.	.																						.	.
Template Sequence		A	P	L	S	A	R	D	F	C	A	A	V	I	M	.	.	.	.	.	P	N	L	I	P	P	L	C	N	L	E	D	L	K	A	Y	K	M	R	I	L	.	.	K	A	C	K	D	E	N	F	T	P	L	M	T	L	F	F	K	N	Y	D	E	K	F	L	Y	S	A	K	D	E	I	F	G	I	L	Y	P	A
Template Known Secondary structure							T	T		S						.	.	.	.	.				S	S				S													.	.				T	T	S							B				S											T	T	T		S	B				B	T
Template Predicted Secondary structure																.	.	.	.	.																						.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure													.	.																								.	.	.	.	.	.	.	.
Query SS confidence													.	.																								.	.	.	.	.	.	.	.
Query Sequence		A	L	D	L	A	G	D	E	L	G	F	.	.	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	.	.	.	.	.	.	.	.	G	E	A	A	G	P	E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	I	E	D	R	A	L	M	D	F
Query Conservation													.	.																								.	.	.	.	.	.	.	.
Alig confidence													.	.																								.	.	.	.	.	.	.	.																												.	.
Template Conservation																																																																									.	.
Template Sequence		G	I	T	T	N	S	N	G	G	V	S	S	F	D	I	E	Y	L	K	P	T	L	E	A	M	S	D	L	N	I	P	L	L	V	H	G	E	T	N	D	F	V	M	D	R	E	S	N	F	A	K	I	Y	E	K	L	A	K	H	F	P	R	L	K	I	V	M	E	H	I	T	.	.	T	K	T	L	C	E	L
Template Known Secondary structure		T	S	S	S	S		T	T	S	B																		T	T										S	S		G	G	G	T	T	G	G	G												T	T	S						S			.	.	S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.
		235	.	.		.	.	240	.	.	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.									280	.	.	.	.	.		.
Predicted Secondary structure					.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Query SS confidence					.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Query Sequence		L	A	E	.	Q	Q	I	G	I	E	S	C	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	N	I	Q	T	S	T	V	A	E	L	A	.	.	.	.	.	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I	N	T	D	D	.	.	.	.	.	.	.	.	P	G	V	Q	G	V	.	D
Query Conservation					.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Alig confidence					.										.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		L	K	D	Y	E	N	L	Y	A	T	I	T	L	H	H	L	I	I	T	L	D	D	V	I	G	G	K	M	N	P	H	L	F	C	K	P	I	A	K	R	Y	E	D	K	E	A	L	C	E	L	A	F	S	G	Y	E	K	V	M	F	G	S	D	S	A	P	H	P	K	G	C	A	A	G	V	F	S	A	P	V
Template Known Secondary structure						T	T							S	G	G	G	T								T	S	S			G	G	G			S	S																	T	T		T	T							B				B					S		B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	I	H	E	Y	T	V	A	A	P	A	A	G	L	S	R	E	Q	I	R	Q	A	Q	.	I	N	G	L	E	M	A	F	L	S
Query Conservation																									.
Alig confidence													.												.
Template Conservation													.
Template Sequence		I	L	P	V	L	A	E	L	F	K	Q	.	N	S	S	E	E	N	L	Q	K	F	L	S	D	N	T	C	K	I	Y	D	L	K
Template Known Secondary structure													.		S										T								T
Template Predicted Secondary structure													.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions