Job Description P22333 Confidence 77.70% Date Thu Jan 5 11:38:52 GMT 2012 Rank 131 Aligned Residues 233 % Identity 9% Template c3jzeC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 Resolution 1.80 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.
Predicted Secondary structure																					.	.																																																										.
Query SS confidence																					.	.																																																										.
Query Sequence		A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	.	.	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	.	F
Query Conservation																					.	.																																																										.
Alig confidence																					.	.						.	.	.	.	.	.																																															.
Template Conservation																												.	.	.	.	.	.
Template Sequence		M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	S	P	I	.	.	.	.	.	.	T	T	V	D	A	A	I	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	A	D	E	L	E	R	G	F	H	E	G	V
Template Known Secondary structure												T	T		S								S	S	S			.	.	.	.	.	.		S															S		T	T													T	T												T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	H	R	D	Q	I	T	A	L	D	L	A	G	D	E	L	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	.	.	.	.	.	.	.	.	.	.	.	E	A	A	G	P	E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	A	A	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	V	D	A	I	M	P	V	L	E	R	M	E	K	L	G	I	P	L	L	V	H	G	E	V	T	H	A	D	V	D	I	F	D	R	E	A	R	F	I	D	T	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I
Template Known Secondary structure								B	T	T	S	S	T	T		T	T	S	B	S		T	T	T	T											T												T	T	S		G	G	G									T								S	T	T							S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.														.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.						.								.	.	.	.	.	.
Query SS confidence																			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.						.								.	.	.	.	.	.
Query Sequence		I	E	D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	.	.	E	S	C	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	.	.	.	.	E	H	G	I	R	.	A	S	I	N	T	D	D	.	.	.	.	.	.
Query Conservation																			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.						.								.	.	.	.	.	.
Alig confidence			.																.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.						.								.	.	.	.	.	.
Template Conservation			.
Template Sequence		T	.	T	K	D	A	A	Q	Y	V	R	D	G	N	D	Y	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	D	M	L	V	G	G	I	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	T	R	A	F	L	G	T	D	S	A	P	H	S	R	H
Template Known Secondary structure			.	S										S		T	T																			T	T	S			G	G	G			S	S																	T	T		T	T							B				B
Template Predicted Secondary structure			.
Template SS confidence
		180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
										280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																															.
Query SS confidence		.	.	.	.	.	.	.	.																															.
Query Sequence		.	.	.	.	.	.	.	.	P	G	V	Q	G	V	D	I	I	H	E	Y	T	V	A	A	P	A	A	G	L	S	R	E	Q	I	R	Q	A	Q	.	I	N	G	L	E	M	A	F	L	S
Query Conservation		.	.	.	.	.	.	.	.																															.
Alig confidence		.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		R	K	E	T	S	C	G	C	A	G	C	F	N	A	P	S	A	L	G	S	Y	A	A	V	F	E	E	M	N	A	L	A	H	F	E	A	F	C	S	L	N	G	P	Q	F	Y	G	L	P
Template Known Secondary structure				S	S	S	S								T	T	T												T	T		G	G	G							T							T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions