Job Description P22333 Confidence 90.50% Date Thu Jan 5 11:38:52 GMT 2012 Rank 117 Aligned Residues 216 % Identity 11% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F	L	A	H
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		L	E	L	M	F	E	E	M	A	A	A	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	.	.	.	.	.	.	.	.	.	.	N	A	D	V	A	A	V	A	K	A	Y	P	D	K	F	H	P	V	G	S	I	E	.	A	A	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L
Template Known Secondary structure													T												T	T	T					.	.	.	.	.	.	.	.	.	.											S	T	T	T									.		S	S														T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																					.	.																									.	.	.	.	.	.	.
Query SS confidence																					.	.																									.	.	.	.	.	.	.
Query Sequence		R	D	Q	I	T	A	L	D	L	A	G	D	E	L	G	F	P	G	S	.	.	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	A	.	.	.	.	.	.	.	G	P	E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	I	E	D	R	A
Query Conservation																					.	.																									.	.	.	.	.	.	.
Alig confidence																					.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	R	I	V	N	L	E	P	G	V	W	A	T	P	M	H	V	D	D	R	R	L	Y	P	L	Y	A	F	C	E	D	N	G	I	P	V	I	M	M	T	G	G	N	A	G	P	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	D	F	P	D	L	T	V	V	S	S	H	G	N	W	P	W	V	Q
Template Known Secondary structure		T								G	G	G	S	S	S				T	T		G	G	G										T	T								S	S	S		S	S	S	G	G	G	G													T	T							G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	.	.	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G	V	D	I	I	H	E	Y	T	V	A	A	P	A	A	G	L	S	R	E	Q	I	R	Q	A
Query Conservation																																									.	.
Alig confidence																										.	.	.	.												.	.															.	.	.	.
Template Conservation																										.	.	.	.																												.	.	.	.
Template Sequence		E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	.	.	.	.	G	H	A	D	F	I	Q	A	A	N	S	F	L	A	D	R	M	L	F	G	T	A	Y	P	M	C	P	.	.	.	.	L	K	E	Y	T	E	W	F	L	T	L	P	I	K	P	D	A	M	E	K	I
Template Known Secondary structure											T	T						G	G	G	G	S	S	S	T	.	.	.	.	T									T	T	T	T	T	T	T	B						B	T	S	S		.	.	.	.										T	S
Template Predicted Secondary structure																										.	.	.	.																												.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		309		310	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	I	N	G	L	E
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		L	H	G	N	A	E	R
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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