Phyre 2 alignment of P22333 with c3ij6A

Job Description P22333
Confidence 97.79% Date Thu Jan 5 11:38:52 GMT 2012

Rank 73 Aligned Residues 274

% Identity 12% Template c3ij6A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	P	L	T	D	I	H	R	H	L	D	G	N	I	R	P	Q	T	I	L	E	L	G	R	Q	Y	N	I	S	L	P	A	Q	S	L	E	T	L	I	P	H	V	Q	V	I	A	N	E	P	D	L	V	S	F	L	T	K	L	D	W	G	V	K	V	L	A	S	L	D	A	C	R	R	V	A	F	E	N	I	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	T	K	I	D	A	Y	A	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	A	K	Y	Y	Q	K	M	L	S	V	E	P	N	I	P	N	M	F	P	F	I	K	I	K	T	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	E	R	L	T
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T						G	G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.																				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.

	86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F	L	A	H	R	D	Q	I	T	A
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence	K	W	P	D	Q	N	T	K	Q	V	I	S	L	A	N	I	S	P	E	D	F	T	D	S	K	T	S	A	E	L	C	Q	S	A	N	E	E	L	S	N	L	V	D	Q	H	P	G	K	F	A	G	A	V	A	I	L	P	M	N	N	I	E	S	A	C	K	V	I	S	S	I	K	D	D	.	E	N	L	V	G
Template Known Secondary structure	T		S		T	T									S			G	G	G	T	S																								T	T	T										T	T																.	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
	48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.

	166	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	D	L	A	G	D	E	L	G	F	P	G	.	.	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	A	G	P	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K
Query Conservation													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	Q	I	F	T	R	H	L	G	K	S	I	A	D	K	E	F	R	P	V	L	A	Q	A	A	K	L	H	V	P	L	W	M	H	P	V	F	D	A	R	K	P	D	N	N	L	V	F	S	W	E	Y	E	L	S	Q	A	M	L	Q	L	V	Q	S	D	L	F	Q	D	Y	P	N	L	K	I	L	V	H	H	A
Template Known Secondary structure					S			T	T			T	T	S	T	T	T										T	T											T	T	S	S	S			T	T	T																T	T						T	T						S	G	G
Template Predicted Secondary structure
Template SS confidence
	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																														.	.																	.
Query SS confidence																																														.	.																	.
Query Sequence	A	I	E	D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	.	.	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G	V	.	D	I	I	H	E	Y	T	V	A	A	P	A	A	G	L	S
Query Conservation																																														.	.																	.
Alig confidence																																														.	.																	.
Template Conservation
Template Sequence	G	A	M	V	P	F	F	S	G	R	I	D	H	I	L	D	E	K	H	A	Q	D	F	K	K	F	Y	V	D	T	A	I	L	G	N	T	P	A	L	Q	L	A	I	D	Y	Y	G	I	D	H	V	L	F	G	T	D	A	P	F	A	V	M	P	S	G	A	D	Q	I	I	T	Q	A	I	N	D	L	T	I	S
Template Known Secondary structure	G	T	T	T	T	T	S								S								G	G	G							S	S	S														G	G	G							B	T	S	S	S	T	T	T		S										T	S	S	S
Template Predicted Secondary structure
Template SS confidence
	207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

	302	.	.	.	.	.	.	.		310	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence	R	E	Q	I	R	Q	A	Q	.	I	N	G	L	E
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence	D	K	D	K	Q	K	I	F	H	D	N	Y	Y	S
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
	287	.	.	290	.	.	.	.	.	.	.	.	.	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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