Job Description P22333 Confidence 99.50% Date Thu Jan 5 11:38:52 GMT 2012 Rank 25 Aligned Residues 274 % Identity 13% Template c3hpaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of an amidohydrolase gi:44264246 from an2 evironmental sample of sargasso sea Resolution 2.20 Å

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		2	.	.	.					.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.			.
Query SS confidence						.	.	.	.			.
Query Sequence		I	D	T	T	.	.	.	.	L	P	.	L	T	D	I	H	R	H	L	D	G	N	I	R	P	Q	T	I	L	E	L	G	R	Q	Y	N	I	S	L	P	A	Q	S	L	E	T	L	I	P	H	V	Q	V	I	A	N	E	P	D	L	V	S	F	L	T	K	L	D	W	G	V	K	V	L	A	S	L	D	A	C
Query Conservation						.	.	.	.			.
Alig confidence						.	.	.	.			.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		L	D	L	R	G	H	L	V	I	P	G	L	V	N	T	H	H	H	M	Y	Q	S	L	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	P	A	A	Q	N	A	E	L	F	G	W	L	T	N	L	Y	K	I	W	A	H	L	T	.	P	E	M	I
Template Known Secondary structure					T	T														G	G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T															T	T			.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	V	A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F
Query Conservation
Alig confidence																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	S	T	L	T	A	M	A	E	L	L	Q	S	G	C	T	T	S	S	D	H	.	.	.	.	L	Y	I	Y	P	N	G	S	R	L	D	D	S	I	G	A	A	Q	R	I	.	.	.	.	.	.	.	.	.	.	G	M	R	F	H	A	S	R	G	A	M	S	E	P	D	I	L	R	D	T	Q	R	L	I
Template Known Secondary structure														T	T	T								.	.	.	.	B					T	T														.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																								.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.											.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		157	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																																												.	.	.	.
Query SS confidence								.	.	.	.	.																																												.	.	.	.
Query Sequence		L	A	H	R	D	Q	.	.	.	.	.	I	T	A	L	D	L	A	G	D	E	L	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	A	G	P	E	.	.	.	.	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	I	E
Query Conservation								.	.	.	.	.																																												.	.	.	.
Alig confidence								.	.	.	.	.																																												.	.	.	.
Template Conservation
Template Sequence		E	T	Y	H	D	E	G	R	Y	A	M	L	R	V	V	V	A	P	C	S	P	F	S	V	S	R	D	L	M	R	D	A	A	V	L	A	R	E	Y	G	V	S	L	H	T	H	L	A	E	N	V	N	D	I	A	Y	T	P	A	E	Y	A	E	D	L	G	W	V	G	H	D	V	W	H	A	H	C	V	Q	L
Template Known Secondary structure								S	T	T		S								S		T	T	T	S																T								S		S					T									T	T	T			S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.								.
Predicted Secondary structure																																																												.														.	.	.	.	.	.	.
Query SS confidence																																																												.														.	.	.	.	.	.	.
Query Sequence		D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G	V	.	D	I	I	H	E	Y	T	V	A	A	P	A	A	.	.	.	.	.	.	.	G
Query Conservation																																																												.														.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																												.														.	.	.	.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		D	D	A	G	I	G	L	F	A	R	T	G	T	G	V	A	H	C	P	C	S	N	M	R	L	A	S	.	.	.	.	G	I	A	P	V	K	K	M	R	L	A	G	V	P	V	G	L	G	V	D	G	S	A	S	N	D	G	A	Q	M	V	A	E	V	R	Q	A	L	L	L	Q	R	V	G	F	G	P	D	A
Template Known Secondary structure													T													T	T		.	.	.	.												T										T	T	S	S																						T	T	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	S	R	E	Q	I	R	Q	A	Q	.	I	N	G	L	E	M	A	F	L	S
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	T	A	R	E	A	L	E	I	A	T	L	G	G	A	K	V	L	N	R	D
Template Known Secondary structure		S										T								T		S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions