Job Description P22333 Confidence 99.46% Date Thu Jan 5 11:38:52 GMT 2012 Rank 27 Aligned Residues 257 % Identity 19% Template c2pajA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative cytosine/guanine deaminase; PDBTitle: crystal structure of an amidohydrolase from an environmental sample of2 sargasso sea Resolution 2.70 Å

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		2	.	.	.					.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.			.
Query SS confidence						.	.	.	.			.
Query Sequence		I	D	T	T	.	.	.	.	L	P	.	L	T	D	I	H	R	H	L	D	G	N	I	R	P	Q	T	I	L	E	L	G	R	Q	Y	N	I	S	L	P	A	Q	S	L	E	T	L	I	P	H	V	Q	V	I	A	N	E	P	D	L	V	S	F	L	T	K	L	D	W	G	V	K	V	L	A	S	L	D	A	C
Query Conservation						.	.	.	.			.
Alig confidence						.	.	.	.			.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	A	T	D	C	V	I	Y	P	A	W	V	N	T	H	H	H	L	F	Q	S	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	P	F	R	A	L	F	D	E	R	R	F
Template Known Secondary structure					B	T														G	G	G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																																											.	.	.	.	90	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	V	A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I	D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		R	L	A	A	R	I	G	L	I	E	L	A	R	S	G	C	A	T	V	A	D	H	N	Y	V	Y	Y	P	G	M	P	F	.	.	.	.	.	.	.	.	.	D	S	S	A	I	L	F	E	E	A	E	K	L	G	L	R	F	V	L	L	R	G	G	A	T	Q	T	R	Q	L	E	A	D	L	P	T	A	L	R
Template Known Secondary structure														T	T	T													T	T		S	S	.	.	.	.	.	.	.	.	.													T	T											S				S		S	T	T	S		G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F	L	A	H	R	D	Q	.	.	.	.	.	.	I	T	A	L	D	L	A	G	D	E	L	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	A	G	P	E	S	I	W	Q	A	I	R	E	L	G
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	T	L	D	A	Y	V	A	D	I	E	R	L	A	A	R	Y	H	D	A	S	P	R	A	M	R	R	V	V	M	A	P	T	T	V	L	Y	S	I	S	P	R	E	M	R	E	T	A	A	V	A	R	R	L	G	L	R	M	H	S	H	L	S	G	K	S	P	V	A	F	C	G	E	H	D	W	L	G	S
Template Known Secondary structure																			T				S	T	T		S								T	T	T	T	T	S	S															T	T																			T	T			S	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		A	E	R	I	G	H	G	V	K	A	I	E	D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G	V	.	D	I	I	H	E	Y	T	V	A
Query Conservation																																																																								.
Alig confidence												.	.																							.	.	.	.	.	.	.	.	.																												.
Template Conservation												.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		D	V	W	Y	A	H	L	V	K	V	.	.	D	A	D	E	I	A	L	L	A	Q	T	G	T	G	V	A	H	C	P	Q	S	N	.	.	.	.	.	.	.	.	.	G	R	L	P	V	R	E	M	A	D	A	G	V	P	V	S	I	G	V	D	G	A	A	S	N	E	A	A	D	M	I	S	E	V	H	M	T
Template Known Secondary structure		T					S			S		.	.												T											.	.	.	.	.	.	.	.	.						T	T					T														S			S
Template Predicted Secondary structure												.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.										.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		295	.				.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure				.	.	.									.
Query SS confidence				.	.	.									.
Query Sequence		A	P	.	.	.	A	A	G	L	S	R	E	Q	.	I	R	Q	A	Q	I	N	G	L	E	M	A	F	L	S	A
Query Conservation				.	.	.									.
Alig confidence				.	.	.									.
Template Conservation
Template Sequence		W	L	A	Q	R	A	R	L	A	S	I	A	E	V	I	H	W	G	T	A	G	G	A	R	V	M	G	L	D	E
Template Known Secondary structure								T												T								T		T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions