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Job DescriptionP22333
Confidence96.89%DateThu Jan 5 11:38:52 GMT 2012
Rank97Aligned Residues183
% Identity19%Templatec2gzxB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative tatd related dnase; PDBTitle: crystal structure of the tatd deoxyribonuclease mw0446 from2 staphylococcus aureus. northeast structural genomics consortium3 target zr237.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160. ...
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Query Sequence  IDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QIT
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Template Sequence  LSEVITRAREAGVDRXFVVGF. . . . NKSTIERAXKLIDEYDFLYGIIGWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEX
Template Known Secondary structure  TT


....S
TT


GGGGGG

TTSTT
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   18.20.........30........ .40.........50.........60.........70.........80.........90...
 
   165....170....... ..180.........190.........200.........210.........220.........230........ .240.
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Query Sequence  ALDLAGDELGFPG. . SLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQ. QIG
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Template Sequence  GLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREA. TQDCIDILLEEHAEEVGGIXHSFSGSPEIADIVTNKLNFY
Template Known Secondary structure 
S

SS
T

S
.TTGGGT
TT

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TS

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   94.....100.........110.........120.........130.. .......140.........150.........160.........170..
 
   242.......250.........260.........270 .........280...... ...290.........300.........
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Query Sequence  IESCLTSNIQTSTVAELAAHPLKTFLEHG. . IRASINTDDPGVQGVD. . . . . . . . . . IIHEYTVAAPAAGLSREQIRQAQ
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Template Sequence  ISLGGPVTFKNAK. . . . . . . QPKEVAKHVSXERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQT
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GGGG
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GGG

BTTB


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   173......180..... ....190.........200.........210.........220.........230.........240.....
 
   310....
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Query Sequence  . INGLE
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Template Sequence  TKNAEK
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   246...250.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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