Job Description P22333 Confidence 96.85% Date Thu Jan 5 11:38:52 GMT 2012 Rank 99 Aligned Residues 311 % Identity 12% Template c1rjqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-aminoacylase; PDBTitle: the crystal structure of the d-aminoacylase mutant d366a Resolution 1.80 Å

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		2	.	.	.					.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																																.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure						.	.	.	.			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	T	T	.	.	.	.	L	P	.	L	T	D	I	H	R	H	L	D	G	N	I	R	P	Q	T	I	L	E	L	G	R	Q	Y	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	A	Q	S	L	E	T	L	I	P
Query Conservation						.	.	.	.			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	V	A	G	K	V	V	S	P	G	F	I	D	S	H	T	H	D	D	N	Y	L	L	K	H	R	D	M	T	P	K	I	S	Q	G	V	T	T	V	V	T	G	N	C	G	I	S	L	A	P	L	A	H	A	N	P	P	A	P	L	D	L	L	D	E	G	G	S	F	R	F	A	R	F	S	D	Y	L	E
Template Known Secondary structure					T	T										S	S				T	T						T	T						T	T	T							S		T	T			S		S				S	S			T	T	G	G	G	G		S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		46	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		H	V	Q	V	I	A	N	E	P	D	.	.	.	.	.	L	V	S	F	L	T	K	L	D	W	G	V	K	V	L	A	S	L	D	A	C	R	R	V	A	F	E	N	I	E	D	A	A	R	H	G	L	H	Y	V	E	L	R	F	S	P	G	Y	M	A	M	A	H	Q	L	P	V	A	G	V	V	E	A	V	I
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.																																																.	.	.													.	.	.
Template Conservation																																																																.	.	.													.	.	.
Template Sequence		A	L	R	A	A	P	P	A	V	N	A	A	C	M	V	G	H	S	T	L	R	A	A	V	M	P	D	L	R	R	E	A	T	A	D	E	I	Q	A	M	Q	A	L	A	D	D	A	L	A	S	G	A	I	G	I	S	T	G	A	F	Y	P	.	.	.	P	A	A	H	A	S	T	E	E	I	I	E	.	.	.
Template Known Secondary structure						S			S	S																	S			S	S																					T								T	T	S	G	.	.	.	G	G	T	T									.	.	.
Template Predicted Secondary structure																																																																.	.	.													.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		D	G	V	R	E	G	C	R	T	F	G	V	Q	A	K	L	I	G	I	M	S	R	T	F	G	E	A	A	C	Q	Q	E	L	E	A	F	L	A	H	R	D	Q	I	T	A	L	D	L	A	G	D	E	L	.	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G
Query Conservation																																																							.
Alig confidence		.	.																																																				.
Template Conservation		.	.
Template Sequence		.	.	V	C	R	P	L	I	T	H	G	G	V	Y	A	T	H	M	R	D	E	G	E	H	I	V	Q	A	L	E	E	T	F	R	I	G	R	E	L	D	V	P	V	V	I	S	H	H	K	V	M	G	K	L	N	F	G	R	S	K	E	T	L	A	L	I	E	A	A	M	A	S	Q	D	V	S	L	D	A	Y
Template Known Secondary structure		.	.			T						T								S		S	S	T	T																T	S						S					S	G	G	G	T	T	T													T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		E	A	A	G	P	E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	I	E	D	R	A	.	.	.	.	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.
Template Conservation
Template Sequence		P	Y	V	A	G	S	T	M	L	K	Q	D	R	V	L	L	A	G	R	T	L	I	T	W	C	K	P	Y	P	E	L	S	G	R	D	L	E	E	I	A	A	E	R	G	K	S	K	Y	D	V	V	P	E	L	Q	P	A	G	A	I	Y	F	M	M	D	E	P	D	V	Q	R	I	L	A	F	G	P	T	M	I
Template Known Secondary structure		S		S										T	T	T	T	S	S								S	S		G	G	G	T	T		B								T	T	S											S																			S	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																							.	.	.	.	.	.	.	.									.
Query SS confidence																							.	.	.	.	.	.	.	.									.
Query Sequence		N	T	D	D	P	G	V	Q	G	V	D	I	I	H	E	Y	T	V	A	A	P	.	.	.	.	.	.	.	.	A	A	G	L	S	R	E	Q	.	I	R	Q	A	Q	I	N	G	L	E	M	A	F	L	S	A
Query Conservation																							.	.	.	.	.	.	.	.									.
Alig confidence																							.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		G	S	A	G	L	P	H	D	E	R	P	H	P	R	L	W	G	T	F	P	R	V	L	G	H	Y	S	R	D	L	G	L	F	P	L	E	T	A	V	W	K	M	T	G	L	T	A	A	K	F	G	L	A	E
Template Known Secondary structure							T	T		S	S			T																	T		S	S								T	T	T							T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions