Job Description P22333 Confidence 61.57% Date Thu Jan 5 11:38:52 GMT 2012 Rank 139 Aligned Residues 155 % Identity 12% Template c1e9yB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:urease subunit beta; PDBTitle: crystal structure of helicobacter pylori urease in complex with2 acetohydroxamic acid Resolution 3.00 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	A	G	D	E	L	G	F	P	G	S	L	F	L	S	H	F	N	R	A	R	D	A	G	W	H	I	T	V	H	A	G	E	A	A	G	P	E	S	I	W	Q	A	I	R	E	L	G	A	E	R	I	G	H	G	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	I	H	E	D	W	G	T	T	P	S	A	I	N	H	A	L	D	V	A	D	K	Y	D	V	Q	V	A	I	H	T	D	T	L	N	E	A	G	C	V	E	D	T	M	A	A	I	A	G	R	T	M	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	K	V	A	G	E	H	N	I	L	P
Template Known Secondary structure		B				G	G	G																	T	T		B							T	T		S	S											T	T						T	T	T	T	S	T	T	S		S	T	T	T	G	G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
														226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	I	E	D	R	A	L	M	D	F	L	A	E	Q	Q	I	G	I	E	S	C	L	T	S	N	I	Q	T	S	T	V	A	E	L	A	A	H	P	L	K	T	F	L	E	H	G	I	R	A	S	I	N	T	D	D	P	G	V	Q	G	V	.	D	I	I	H	E	Y	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																													.
Template Conservation
Template Sequence		A	S	T	N	P	T	I	P	F	T	V	N	T	E	A	E	H	M	D	M	L	M	V	C	H	H	K	D	K	S	I	K	E	D	V	Q	F	A	D	S	R	I	R	P	Q	T	I	A	A	E	D	T	L	H	D	M	G	A	F	S	I	T	S	S	D	S	Q	A	M	G	R	V	G	E	V	I	T	R	T	W
Template Known Secondary structure					G	G	G		S		B	T	T												T	T	T			S	S																										T	T	S								T	T	S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		293	.	.	.	.	.																.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		V	A	A	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	R	E	Q	.	I	R	Q	A	Q	I	N	G	L	E	M	A	F	L	S	A	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		Q	T	A	D	K	N	K	K	E	F	G	R	L	K	E	E	K	G	D	N	D	N	F	R	I	K	R	Y	L	S	K	Y	T	I	N	P	A	I	A	H	G	I	S	E	Y
Template Known Secondary structure													S		S	S			S	S	S										G	G	G	T							T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions