Job Description P0AB58 Confidence 99.82% Date Thu Jan 5 11:14:41 GMT 2012 Rank 16 Aligned Residues 334 % Identity 12% Template d1qsaa1 SCOP info alpha-alpha superhelix Bacterial muramidases Bacterial muramidases Resolution 1.65

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	L	L	F	L	L	L	P	V	A	A	A	Y	G	W	Y	M	G	R	R	S	A	Q	Q	N	K	Q	D	E	A	N	R	L	S	R	D	Y	V	A	G	V	N	F	L	L	S	N	Q	Q	D	K	A	V	D	L	F	L	D	M	L	K	E	D	T	G	T	V	E	A	H	L	T	L	G	N	L	F	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	A	R	T	L	Q	S	R	F	V	N	E	L	A	R	R	E	D	W	R	G	L	L	A	F	S	P	E	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E	A	W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D	K	L	F	S	V	W	R	A
Template Known Secondary structure																		T	T											S			S	S														T	T														S		S	S				T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.
Query Sequence		R	G	E	V	D	R	A	I	R	I	H	Q	T	L	M	E	S	A	S	L	T	Y	E	Q	R	L	L	A	I	Q	Q	.	.	.	.	.	.	.	L	G	R	D	Y	M	A	A	G	L	Y	D	R	A	E	D	M	F	N	Q	L	T	D	E	T	D	F	R	I	G	A	L	Q	Q	L	L	Q	I	Y	Q	A	T
Query Conservation																																	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																														.
Template Conservation																																																																					.
Template Sequence		S	G	K	Q	D	P	L	A	Y	L	E	R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T	V	L	T	F	A	R	T	T	G	A	T	D	F	T	R	.	Q	M	A	A	V	A	F	A	S	V	A	R
Template Known Secondary structure		T	T		S															T	T											T			G	G	G														G	G	G								S								.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	W	Q	K	A	I	D	V	A	E	R	L	V	K	L	G	K	D	K	Q	R	V	E	I	A	H	F	Y	C	E	L	A	L	Q	H	M	A	S	D	D	L	D	R	A	M	T	L	L	K	K	G	A	A	A	D	K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V
Query Conservation
Alig confidence																								.																																			.
Template Conservation																								.																																			.
Template Sequence		Q	D	A	E	N	A	R	L	M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	.	Q	I	Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M	R	S	Q	.	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	R	R	G	L	N
Template Known Secondary structure																		T	T					.												T	S		S	T	T															T			.																T
Template Predicted Secondary structure																								.																																			.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																														.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	L	Q	R	V	I	S	Q	D	R	E	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	A	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		T	W	L	A	R	L	P	M	E	A	K	.	E	K	D	E	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q	Q	R	G	F	Y	P	M	V	A	A	Q	R	I	G	E	E	Y	E	L	K	I	D	K	A	P	Q	N	V	D	S	A	L	T	Q	G	P	E
Template Known Secondary structure							S		T	T	G	G	.	G	S														T	T														T	S		S										T	T												S									S
Template Predicted Secondary structure													.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	A	D	I	I	E	A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q	L	Q	R	H	P	T	M	R	V	F	H	K	L	M	D	Y	H	L	N	E	A	E	E	G	R	A	K	E	S	L	M	V
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		M	A	R	V	R	E	L	M	Y	W	N	L	D	N	T	A	R	S	E	W	A	N	L	V	K	S	K	S	K	.	T	E	Q	A	Q	L	A	R	Y	A	F	N	N	Q	W	W	D	L	S	V	Q	A	T	I	A
Template Known Secondary structure											T	T														T	T				.													T	T
Template Predicted Secondary structure																															.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions