Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB58
Confidence99.87%DateThu Jan 5 11:14:41 GMT 2012
Rank11Aligned Residues273
% Identity8%Templated1dcea1
SCOP infoalpha-alpha superhelix Protein prenylyltransferase Protein prenylyltransferase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.... .....90.........100.........110.
Predicted Secondary structure 









..........







Query SS confidence 










































. . . . . . . . . .


























Query Sequence  GVNFLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGE. . . . . . . . . . VDRAIRIHQTLMESASLTYEQRLLAIQ
Query Conservation 
   
     
 
      

   
        

      
 ..........   
       
            
  
Alig confidence 










































..........



















....


Template Conservation             


      
  

    

                         

      
   

   ....   
Template Sequence  FQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG. . . . TWH
Template Known Secondary structure  TT

S
TT
TTS

TT
....
Template Predicted Secondary structure 

















....
Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100........ .110.
 
   112.......120.. .......130.........140.........150....... ..160.........170.........180........
Predicted Secondary structure 


..





.



Query SS confidence 










. .


































.






























Query Sequence  QLGRDYMAAGL. . YDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEW. QKAIDVAERLVKLGKDKQRVEIAHFYCELAL
Query Conservation   
         ..   
                               .                            

 
Alig confidence 










..


































.












.....












Template Conservation   
             

     


  

 
  
                 

      
  .....   
  
      
Template Sequence  HRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITR. . . . . NFSNYSSWHYRSC
Template Known Secondary structure  T
SS


TT
T


TTTTT.....T


Template Predicted Secondary structure 












.....



Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170... ......180......
 
   189190.........200.........210.........220.........230.........240.........250.........260........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  QHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEW
Query Conservation       
    
                            
    
      

   
         

      
    
Alig confidence 

































....



















.




















Template Conservation            
      
      
         ....     

   
   
     .                    
Template Sequence  LLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF. . . . TDPNDQSAWFYHRWLLGRAE. PLFRCELSVEKSTVLQSELES
Template Known Secondary structure  S



SSS

SS
....
SS
SS


.


S



Template Predicted Secondary structure 






....






.





Template SS confidence 















































































   187..190.........200.........210.........220 .........230.........240 .........250.........260.
 
   269270.........280.. .......290.........300.........310.........320........
Predicted Secondary structure 



.





Query SS confidence 













.













































Query Sequence  AEFLQRAVEENTGA. DAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNE
Query Conservation     
  

   
  .     

  
   
    
   
   
   
       
       
Alig confidence 













.













































Template Conservation 
     
    
        

          

     


 


    

  
     
Template Sequence  CKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL
Template Known Secondary structure 
TT

TGGG
GGG
Template Predicted Secondary structure 









Template SS confidence 




























































   371........380.........390.........400.........410.........420.........430.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions