Job Description P0AB58 Confidence 99.73% Date Thu Jan 5 11:14:41 GMT 2012 Rank 24 Aligned Residues 253 % Identity 11% Template d1d8da_ SCOP info alpha-alpha superhelix Protein prenylyltransferase Protein prenylyltransferase Resolution 2.00

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		V	A	G	V	N	F	L	L	S	N	Q	Q	D	K	A	V	D	L	F	L	D	M	L	K	E	D	T	G	T	V	E	A	H	L	T	L	G	N	L	F	R	S	R	G	E	.	V	D	R	A	I	R	I	H	Q	T	L	M	E	S	A	S	L	T	Y	E	Q	R	L	L	A	I	Q	Q	L	G	R	D	Y	M
Query Conservation																																															.
Alig confidence																																															.																					.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		Y	F	R	A	V	L	Q	R	D	E	R	S	E	R	A	F	K	L	T	R	D	A	I	E	L	N	A	A	N	Y	T	V	W	H	F	R	R	V	L	L	R	S	L	Q	K	D	L	Q	E	E	M	N	Y	I	I	A	I	I	E	E	Q	P	K	N	Y	Q	.	.	.	.	V	W	H	H	R	R	V	L	V	E
Template Known Secondary structure										T			S															T	T															T	T																		T	T				.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	A	G	L	Y	D	R	A	E	D	M	F	N	Q	L	T	D	E	T	D	F	R	I	G	A	L	Q	Q	L	L	Q	I	Y	Q	A	T	S	E	W	Q	K	A	I	D	V	A	E	R	L	V	K	L	G	K	D	K	Q	R	V	E	I	A	H	F	Y	C	E	L	A	L	Q	H	M	A	S	D	D	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																						.	.	.	.	.																					.	.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		W	L	K	D	P	S	Q	E	L	E	F	I	A	D	I	L	N	Q	D	A	K	N	Y	H	A	W	Q	H	R	Q	W	V	I	Q	E	F	R	L	W	D	N	E	L	Q	Y	V	D	Q	L	L	K	E	.	.	.	.	.	D	V	R	N	N	S	V	W	N	Q	R	H	F	V	I	S	N	T	T	G	Y	S	D
Template Known Secondary structure				T			T	T													T	T																T			T	T												.	.	.	.	.		T	T															T	T		S		S
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
					196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260										.	.
Predicted Secondary structure		.	.	.																							.																																												.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																							.																																												.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	L	D	R	A	M	T	L	L	K	K	G	A	A	A	D	K	N	S	A	R	V	S	.	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	D	R	E	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	.	.	.	.	.	.	.	.	.	Q	L
Query Conservation		.	.	.																							.																																												.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																							.																														.														.	.	.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		R	A	V	L	E	R	E	V	Q	Y	T	L	E	M	I	K	L	V	P	H	N	E	S	A	W	N	Y	L	K	G	I	L	Q	D	R	G	L	S	R	Y	P	N	L	L	N	Q	L	L	D	L	Q	P	S	H	S	.	S	P	Y	L	I	A	F	L	V	D	I	Y	E	D	M	L	E	N	Q	C	D	N	K	E
Template Known Secondary structure																			S	T	T													T	T	T		G	G	G										T	T						.																		T	T		S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		263	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure														.							.
Query SS confidence														.							.
Query Sequence		G	K	T	A	E	W	A	E	F	L	Q	R	.	A	V	E	E	N	T	.	G	A	D	A	E	L	M	L	A	D	I	I	E	A	R	D	G	S	E	A	A	Q
Query Conservation														.							.
Alig confidence														.							.
Template Conservation
Template Sequence		D	I	L	N	K	A	L	E	L	C	E	I	L	A	K	E	K	D	T	I	R	K	E	Y	W	R	Y	I	G	R	S	L	Q	S	K	H	S	R	E	S	D	I
Template Known Secondary structure																	T	T		G	G	G																S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions