Job Description P0AB58 Confidence 31.26% Date Thu Jan 5 11:14:41 GMT 2012 Rank 300 Aligned Residues 101 % Identity 9% Template c3spaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial; PDBTitle: crystal structure of human mitochondrial rna polymerase Resolution 2.50 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.
Predicted Secondary structure																																						.	.	.																																		.	.
Query SS confidence																																						.	.	.																																		.	.
Query Sequence		K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	D	R	E	.	.	.	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	.	.	T	G	A	D	A	E
Query Conservation																																						.	.	.																																		.	.
Alig confidence																																						.	.	.																																		.	.
Template Conservation
Template Sequence		S	G	Q	Q	Q	R	L	L	A	F	F	K	C	C	L	L	T	D	Q	L	P	L	A	H	H	L	L	V	V	H	H	G	Q	R	Q	K	R	K	L	L	T	L	D	M	Y	N	A	V	M	L	G	W	A	R	Q	G	A	F	K	E	L	V	Y	V	L	F	M	V	K	D	A	G	L	T	P	D	L	L	S	Y
Template Known Secondary structure																			T															S					T	T																	T															T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	A	D	I	I	E	A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	L	Q	C	M	G	R	Q	D	Q	D	A	G	T	I	E	R	C	L	E	Q	M	S	Q
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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