Job Description P0AB58 Confidence 99.66% Date Thu Jan 5 11:14:41 GMT 2012 Rank 31 Aligned Residues 290 % Identity 17% Template c3sf4B_ PDB info PDB header:signaling protein/protein binding Chain: B: PDB Molecule:g-protein-signaling modulator 2; PDBTitle: crystal structure of the complex between the conserved cell polarity2 proteins inscuteable and lgn Resolution 2.60 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																	.	.	.	.																												.	.
Query SS confidence																																	.	.	.	.																												.	.
Query Sequence		V	A	G	V	N	F	L	L	S	N	Q	Q	D	K	A	V	D	L	F	L	D	M	L	K	E	D	T	G	T	V	E	.	.	.	.	A	H	L	T	L	G	N	L	F	R	S	R	G	E	V	D	R	A	I	R	I	H	Q	T	L	M	E	.	.	S	A	S	L	T	Y	E	Q	R	L	L	A	I	Q	Q	L
Query Conservation																																	.	.	.	.																												.	.
Alig confidence																																	.	.	.	.																												.	.
Template Conservation
Template Sequence		L	E	G	E	R	L	C	K	S	G	D	C	R	A	G	V	S	F	F	E	A	A	V	Q	V	G	T	E	D	L	K	T	L	S	A	I	Y	S	Q	L	G	N	A	Y	F	Y	L	H	D	Y	A	K	A	L	E	Y	H	H	H	D	L	T	L	A	R	T	I	G	D	Q	L	G	E	A	K	A	S	G	N	L
Template Known Secondary structure									T	T	T																		S																			T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																						.	.	.	.	.	170	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	D	Y	M	A	A	G	L	Y	D	R	A	E	D	M	F	N	Q	L	T	D	E	T	D	F	R	I	G	A	L	Q	Q	L	L	Q	I	Y	Q	A	T	S	E	W	Q	K	A	I	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	V	K	L	G	K
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	T	L	K	V	L	G	N	F	D	E	A	I	V	C	C	Q	R	H	L	D	I	S	R	E	L	N	D	K	V	G	E	A	R	A	L	Y	N	L	G	N	V	Y	H	A	K	G	K	S	F	G	V	G	E	F	P	E	E	V	R	D	A	L	Q	A	A	V	D	F	Y	E	E	N	L	S	L	V	T	A
Template Known Secondary structure									T																			T	T																							T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																																			.	.	.
Query SS confidence																																							.	.	.	.	.	.																																			.	.	.
Query Sequence		D	K	Q	R	V	E	I	A	H	F	Y	C	E	L	A	L	Q	H	M	A	S	D	D	L	D	R	A	M	T	L	L	K	K	G	A	A	A	.	.	.	.	.	.	D	K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	.	.	.
Query Conservation																																							.	.	.	.	.	.																																			.	.	.
Alig confidence																																							.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		L	G	D	R	A	A	Q	G	R	A	F	G	N	L	G	N	T	H	Y	L	L	G	N	F	R	D	A	V	I	A	H	E	Q	R	L	L	I	A	K	E	F	G	D	K	A	A	E	R	R	A	Y	S	N	L	G	N	A	Y	I	F	L	G	E	F	E	T	A	S	E	Y	Y	K	K	T	L	L	L	A	R	Q
Template Known Secondary structure		T	T																				T																			T	T																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
				244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.																																						.	.	.	.	.	.	.																																.	.	.
Query SS confidence		.	.																																						.	.	.	.	.	.	.																																.	.	.
Query Sequence		.	.	D	R	E	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	T	.	.	.	.	.	.	.	G	A	D	A	E	L	M	L	A	D	I	I	E	A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q	L	Q	R	.	.	.
Query Conservation		.	.																																						.	.	.	.	.	.	.																																.	.	.
Alig confidence		.	.																																						.	.	.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		L	K	D	R	A	V	E	A	Q	S	C	Y	S	L	G	N	T	Y	T	L	L	Q	D	Y	E	K	A	I	D	Y	H	L	K	H	L	A	I	A	Q	E	L	N	D	R	I	G	E	G	R	A	C	W	S	L	G	N	A	Y	T	A	L	G	N	H	D	Q	A	M	H	F	A	E	K	H	L	E	I	S	R	E
Template Known Secondary structure		T	T																			T	T																			T	T																				T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
						312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	P	T	M	R	V	F	H	K	L	M	D	Y	H	L	N	E	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		V	G	D	K	S	G	E	L	T	A	R	L	N	L	S	D	L	Q	M	V	L	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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