Job Description P0AB58 Confidence 99.00% Date Thu Jan 5 11:14:41 GMT 2012 Rank 70 Aligned Residues 201 % Identity 7% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																						.	.	.	.																										.
Query SS confidence																																						.	.	.	.																										.
Query Sequence		L	S	N	Q	Q	D	K	A	V	D	L	F	L	D	M	L	K	E	D	T	G	T	V	E	A	H	L	T	L	G	N	L	F	R	S	R	.	.	.	.	G	E	V	D	R	A	I	R	I	H	Q	T	L	M	E	S	A	S	L	T	Y	E	Q	R	L	.	L	A	I	Q	Q	L	G	R	D	Y	M	A	A	G
Query Conservation																																						.	.	.	.																										.
Alig confidence																			.																			.	.	.	.																										.
Template Conservation																			.
Template Sequence		M	E	N	E	N	K	P	N	V	A	N	F	E	A	A	V	A	.	A	K	D	Y	E	K	A	C	S	E	L	L	L	I	L	S	Q	L	D	S	N	F	G	G	I	Q	E	I	E	F	E	Y	P	A	Q	L	Q	D	L	E	Q	E	K	I	V	Y	F	C	T	R	M	A	T	A	I	T	T	L	F	S	D	P
Template Known Secondary structure			T	T	T	T			B										.	T	T																			T	T	T			T	T		B					G	G	G	T	T																							S	T
Template Predicted Secondary structure																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	D	R	A	E	D	M	F	N	Q	L	T	D	E	T	D	F	R	I	G	A	L	Q	Q	L	L	Q	I	Y	Q	A	T	S	E	W	Q	K	A	I	D	V	A	E	R	L	V	K	L	G	K	D	K	Q	R	V	E	I	A	H	F	Y	C	E	L	A	L	Q	H	M	A	S	D	D	L	D	R	A	M	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	E	I	S	D	L	G	V	Q	R	F	L	V	Y	Q	R	W	L	A	L	I	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	P	F	V	N	A	D	H	I	L	Q	T	Y	N	R	E	P	N	R	K	N
Template Known Secondary structure		T														T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T		S	S					G	G	G				S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	K	K	G	A	A	A	D	K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	D	R	E	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	T	G
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		S	L	E	I	H	L	D	S	S	K	S	S	L	I	K	F	C	I	L	Y	L	P	E	S	N	V	N	L	N	L	D	V	M	W	N	I	S	P	E	L	C	A	S	L	.	C	F	A	L	Q	S	P	R	F	I	G	T	S	T	A	F	N	K	R	A	T	I	L	Q	W	F	P	R	H	L	D	Q	L	K	N
Template Known Secondary structure		T	T	S					S														T	T			S																			.								S				S																			T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		282	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		205	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions