|   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
L | G | R | D | Y | M | A | A | G | L | Y | D | R | A | E | D | M | F | N | Q | L | T | D | E | T | D | F | R | I | G | A | L | Q | Q | L | L | Q | I | Y | Q | A | T | S | E | W | Q | K | A | I | D | V | A | E | R | L | V | K | L | G | K | D | K | Q | R | V | E | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |   |
|   |   |
| . |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | P | V | D | H | I | L | A | G | S | F | E | T | A | M | R | L | L | H | D | Q | V | G | V | T | Q | F | G | P | . |
Y | K | Q | L | F | L | Q | T | Y | A | R | G | R | T | T | Y | Q | A | L | P | C | L | P | S | M | Y | G | Y | P | N | R | N | W | K | D | A | G | L | K | N | G | V | P | A | V | G | L | K | L | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  | S |
| B |
|
|
| G | G | . | G |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |
| S | S | T | T | S |
|
|  |  |  |
|
| B | T | T | T | T | T |
|
| S | S | S |
|
| B |
|
|
|
|
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
926 | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | |
. | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . |
  |
  |   |
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
|
. | . | . | . | 250 | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
. |
A | H | F | Y | C | E | L | A | L | Q | H | M | A | S | D | D | L | D | R | A | M | T | L | L | K | K | G | A | A | A | D | . |
. |
. |
. |
K | N | S | A | R | V | S | I | M | M | G | R | V | F | M | A | K | G | E | Y | A | K | A | V | E | S | L | Q | R | V | I | S | Q | D | R | . |
. |
. |
E | L | V | S | E | T |
Query Conservation |   |
. |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
| . | . | . |   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
D | L | I | Q | R | L | Q | L | C | Y | Q | L | T | T | V | G | K | F | E | E | A | V | E | K | F | R | S | I | L | L | S | V | P | L | L | V | V | D | N | K | Q | E | I | A | E | A | Q | Q | L | I | T | I | C | R | E | Y | I | V | G | L | S | M | E | T | E | R | K | K | L | P | K | E | T | L | E | Q | Q | K | R | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1005 | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . |
  |
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | M | L | Q | T | C | Y | Q | Q | L | G | K | T | A | E | W | A | E | F | L | Q | R | A | V | E | E | N | T | G | A | D | A | E | L | M | L | A | D | I | I | E | A | R | D | G | S | E | A | A | Q | V | Y | I | T | R | Q | L | Q | R | H | P | T | M | R | V | F | H | K | L | M | D | Y | H | L | N | E | A | E | E |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |
Template Sequence |   |
C | E | M | A | A | Y | F | T | H | S | N | L | Q | P | V | H | M | I | L | V | L | R | T | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | L | F | F | K | L | K | N | F | R | T | A | A | A | F | A | R | R | L | L | E | L | G | P | K | P | E | V | A | Q | Q | T | R | K | I | L | S | A | C | E | K | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1085 | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . |
  |
  |   |
332 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | |
. | . | . | . | . | |
370 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
G | R | A | K | E | S | L | . |
. |
. |
. |
. |
. |
. |
. |
M | V | L | R | D | M | V | G | E | K | V | R | S | K | P | R | Y | R | C | Q | K | C | G | F | T | A | . |
Y | T | L | Y | W | . |
H | C | P | S | C | R |
Query Conservation |   |
  |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   | . |   |   |   |   |   | . |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |
Template Sequence |   |
P | T | D | A | Y | Q | L | N | Y | D | M | H | N | P | F | D | I | C | A | A | S | Y | R | P | I | Y | R | G | K | P | V | E | K | C | P | L | S | G | A | C | Y | S | P | E | F | K | G | Q | I | C | K | V | T | T |
Template Known Secondary structure |   |
|
| B | S | S |
|
| S |
|
| T | T | S |
|
|
| B | B | T | T | T |
|
| B |
|
| T | T | S |
|
|  |  |
| T | T | T |
|
|  |  |
| G | G | G | T | T | S | B |
| T | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1152 | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . |
  |