Job Description P0AB58 Confidence 91.58% Date Thu Jan 5 11:14:41 GMT 2012 Rank 132 Aligned Residues 103 % Identity 17% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	H	M	A	S	D	D	L	D	R	A	M	T	L	L	K	K	G	A	A	A	D	K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	D	R	E	L	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E
Query Conservation
Alig confidence																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	L	E	Y	G	N	L	D	A	A	L	D	E	A	K	K	L	.	.	.	.	.	N	D	S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	.	.	.	.	.	.	.	.	.	H	S	F	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	K
Template Known Secondary structure							T	T													.	.	.	.	.																T	T												T	.	.	.	.	.	.	.	.	.	T													T
Template Predicted Secondary structure																					.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.						.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.										.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	E	F	L	Q	R	A	V	E	E	N	T	G	A	D	A	E	L	M	L	A	D	I	I	E	A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		L	S	K	M	Q	N	I	A	Q	T	R	E	D	F	G	S	M	L	.	.	.	.	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A	E	G
Template Known Secondary structure												T	T							.	.	.	.							T												T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.					.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions