Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB58
Confidence45.14%DateThu Jan 5 11:14:41 GMT 2012
Rank249Aligned Residues29
% Identity31%Templatec3iz6X_
PDB info PDB header:ribosomeChain: X: PDB Molecule:40s ribosomal protein s27 (s27e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   356...360. ........370.........380.....
Predicted Secondary structure 

.....























Query SS confidence 





. . . . .























Query Sequence  RCQKCG. . . . . FTAYTLYWHCPSCRAWSTIKPIRG
Query Conservation   
  
 .....         

 
           
Alig confidence 





.....














.







Template Conservation 

  
    





 
 
 
  

 . 
  



Template Sequence  KCQGCFNITTVFSHSQTVVVCPGCQT. VLCQPTGG
Template Known Secondary structure 
TTT

TT
SS



SSS

.

S


SS
Template Predicted Secondary structure 















.


Template SS confidence 


































   38.40.........50.........60... ......70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions