Job Description P0AB58 Confidence 99.93% Date Thu Jan 5 11:14:41 GMT 2012 Rank 3 Aligned Residues 296 % Identity 14% Template c3iegB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:dnaj homolog subfamily c member 3; PDBTitle: crystal structure of p58(ipk) tpr domain at 2.5 a Resolution 2.51 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	R	D	Y	V	A	G	V	N	F	L	L	S	N	Q	Q	D	K	A	V	D	L	F	L	D	M	L	K	E	D	T	G	T	V	E	A	H	L	T	L	G	N	L	F	R	S	R	G	E	V	D	R	A	I	R	I	H	Q	T	L	M	E	S	A	S	L	T	Y	E	Q	R	L	L	A	I	Q	Q	L
Query Conservation
Alig confidence																																																																									.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		D	V	E	K	H	L	E	L	G	K	K	L	L	A	A	G	Q	L	A	D	A	L	S	Q	F	H	A	A	V	D	G	D	P	D	N	Y	I	A	Y	Y	R	R	A	T	V	F	L	A	X	G	K	S	K	A	A	L	P	D	L	T	K	V	I	A	L	K	X	D	F	T	A	.	.	.	.	A	R	L	Q	R
Template Known Secondary structure																T	T																	T	T															T	T																	T	T				.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	D	Y	M	A	A	G	L	Y	D	R	A	E	D	M	F	N	Q	L	T	D	E	T	D	F	R	I	G	A	L	Q	Q	L	L	Q	I	Y	Q	A	T	S	E	W	Q	K	A	I	D	V	A	E	R	.	.	.	.	.	.	.	.	.	.	L	V	K	L	G	K	D	K	Q	R	V	E	I	A	H	F	Y
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	L	L	L	K	Q	G	K	L	D	E	A	E	D	D	F	K	K	V	L	K	S	N	P	S	E	Q	E	E	K	E	A	E	S	Q	L	V	K	A	D	E	X	Q	R	L	R	S	Q	A	L	D	A	F	D	G	A	D	Y	T	A	A	I	T	F	L	D	K	I	L	E	V	C	V	W	D	A	E	L	R
Template Known Secondary structure									T														T	T																																	T	T														T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	E	L	A	L	Q	H	M	A	S	D	D	L	D	R	A	M	T	L	L	K	K	G	A	A	A	D	K	N	S	A	R	V	S	I	M	M	G	R	V	F	M	A	K	G	E	Y	A	K	A	V	E	S	L	Q	R	V	I	S	Q	D	R	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	R	A	E	C	F	I	K	E	G	E	P	R	K	A	I	S	D	L	K	A	A	S	K	L	K	S	D	N	T	E	A	F	Y	K	I	S	T	L	Y	Y	Q	L	G	D	H	E	L	S	L	S	E	V	R	E	C	L	K	L	D	Q	D	H	K	R	C	F	A	H	Y	K	Q	V	K	K	L	N	K	L
Template Known Secondary structure												T															S		S																	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
																																			248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	E	T	L	E	M	L	Q	T	C	Y	Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	T	G	A	.	D	A	E	L	M	L	A	D	I	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		I	E	S	A	E	E	L	I	R	D	G	R	Y	T	D	A	T	S	K	Y	E	S	V	X	K	T	E	P	S	V	A	E	Y	T	V	R	S	K	E	R	I	C	H	C	F	S	K	D	E	K	P	V	E	A	I	R	I	C	S	E	V	L	Q	X	E	P	D	N	V	N	A	L	K	D	R	A	E	A	Y	L
Template Known Secondary structure											T	T																S		S																			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q	L	Q	R	H	P	.	T	M	R	V	F	H	K	L	M	D	Y	H	L	N	E	A	E	E	G	R
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		I	E	E	X	Y	D	E	A	I	Q	D	Y	E	A	A	Q	E	H	N	E	N	D	Q	Q	I	R	E	G	L	E	K	A	Q	R	L	L	K	Q	S	Q	K
Template Known Secondary structure			T	T														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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