Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB58
Confidence47.21%DateThu Jan 5 11:14:41 GMT 2012
Rank242Aligned Residues21
% Identity29%Templatec3h0gL_
PDB info PDB header:transcriptionChain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   355....360......... 370.....
Predicted Secondary structure 









...





Query SS confidence 














. . .





Query Sequence  YRCQKCGFTAYTLYW. . . HCPSCR
Query Conservation 
 
  
         ... 

 
 
Alig confidence 














...





Template Conservation 





     

  
 






Template Sequence  YLCADCGARNTIQAKEVIRCRECG
Template Known Secondary structure 
B
SSS

B



SSS



SSS
Template Predicted Secondary structure 














Template SS confidence 























   22.......30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions