Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB58
Confidence60.01%DateThu Jan 5 11:14:41 GMT 2012
Rank202Aligned Residues29
% Identity21%Templatec2ja6L_
PDB info PDB header:transferaseChain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii 7.7 PDBTitle: cpd lesion containing rna polymerase ii elongation complex2 b
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360......... 370.........380..
Predicted Secondary structure 










...












Query SS confidence 















. . .












Query Sequence  RYRCQKCGFTAYTLYW. . . HCPSCRAWSTIKP
Query Conservation   
 
  
         ... 

 
        
Alig confidence 















...












Template Conservation   






    

  
 


 


 





Template Sequence  KYICAECSSKLSLSRTDAVRCKDCGHRILLKA
Template Known Secondary structure 

B
SSS






TTSTT

SS





B

Template Predicted Secondary structure 
















Template SS confidence 































   28.30.........40.........50.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions