Job Description P0AB58 Confidence 25.56% Date Thu Jan 5 11:14:41 GMT 2012 Rank 333 Aligned Residues 116 % Identity 14% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.												.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	L	G	K	T	A	E	W	A	E	F	L	Q	R	A	V	E	E	N	T	G	A	D	A	E	L	M	L	A	D	I	I	E	.	.	.	.	.	.	.	.	.	.	.	A	R	D	G	S	E	A	A	Q	V	Y	I	T	R	Q	L	Q	R	H	P	T	M	R	V	F	H	K	L	M	D	Y	H	L	N	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		Q	K	D	V	T	P	K	N	A	F	A	A	I	K	K	K	M	.	N	S	P	N	P	H	S	S	C	Y	S	L	L	V	L	E	S	I	V	K	N	C	G	A	P	V	H	E	E	V	F	T	K	E	N	C	E	M	F	S	S	F	L	E	S	T	P	H	E	N	V	R	Q	K	M	L	E	L	V	Q	T	W
Template Known Secondary structure		T	T	S	S														.	T		S	S																		S									S	S															S
Template Predicted Secondary structure																			.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.																				.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		A	E	E	G	R	A	K	E	S	L	M	V	L	R	D	M	V	G	E	K	V	R	S	K	P	R	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Q	K	C	G	F	T	A	Y	T	L	Y	W	.	.	H	C	P	S	C	R	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		A	Y	A	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G	H	T	F	P	E	L	R	E	M	F	T	A	D	T	A	P	N	W	A	D	G	R	V	C	H	R	C	R	V	E	F	T	F	T	N	R	K	H	H	C	R	N	C	G	Q
Template Known Secondary structure					T	T	T		S	S														T	T													S									S	B		T	T	T			B			S	S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions