 |
Job Description | P62623 | Confidence | 65.46% | Date | Thu Jan 5 12:07:44 GMT 2012 |
Rank | 23 | Aligned Residues | 56 |
% Identity | 16% | Template | d1qo0a_ |
SCOP info | Periplasmic binding protein-like I
| Periplasmic binding protein-like I
| L-arabinose binding protein-like
|
Resolution | 2.25 |
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | V | G | P | R | K | D | D | I | C | Y | A | T | T | N | R | Q | E | A | V | R | A | L | A | E | Q | A | E | V | V | L | V | V | G | S | K | N | S | S | N | S | N | R | L | A | E | L | A | Q | R | M | G | K | R | A | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
| . |   |   |
|
|   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
Template Sequence |   |
P | I | E | T | L | S | Q | D | P | G | G | D | P | D | R | Y | R | L | C | A | . |
E | D | F | I | R | N | R | G | V | R | F | L | V | G | C | Y | M | S | H | T | R | K | A | V | M | P | V | V | E | R | A | D | A | L | L | C |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | S |
|
|
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|