Return to main results Retrieve Phyre Job Id

Job DescriptionP62623
Confidence29.81%DateThu Jan 5 12:07:44 GMT 2012
Rank129Aligned Residues105
% Identity13%Templatec3ng3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   208.210.........220.........230.........240...... ...250.........260.........270.........280.....
Predicted Secondary structure 












..













Query SS confidence 






































. .






































Query Sequence  RALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLID. . DAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL
Query Conservation    

  

 





 




 

 


      
  

..   

          









  

 


  
   
Alig confidence 






































..





































.
Template Conservation   


  

 
 
    
   
  

  
      



 
  
  
  
 
 
  




 
      
  
   
   .
Template Sequence  AQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMVPAAVQAGARVASVAGFPSGKHVSAVKAHEAALAVAS.
Template Known Secondary structure  TT


TT

T
S
GGGT


STTT

S
T.
Template Predicted Secondary structure 

























.
Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80....
 
   286...290.........300.........310....
Predicted Secondary structure 











Query SS confidence 




























Query Sequence  GGGEAIPLEGREENIVFEVPKELRVDIRE
Query Conservation              
   
 

         
Alig confidence  .



























Template Conservation  .

 


 


   
  
    
  

  
Template Sequence  . GAAEIDMVIDVGAALAGDLDGVRADIAA
Template Known Secondary structure  .T
S

TT
Template Predicted Secondary structure  .







Template SS confidence 




























   87..90.........100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions