 |
Job Description | P62623 | Confidence | 25.85% | Date | Thu Jan 5 12:07:44 GMT 2012 |
Rank | 149 | Aligned Residues | 69 |
% Identity | 12% | Template | c3mmzA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative had family hydrolase; |
PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680
|
Resolution | 1.84 Å |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | H | N | R | Y | V | V | D | S | L | R | E | R | G | A | I | F | I | E | Q | I | S | E | V | P | D | G | A | I | L | I | F | S | A | H | G | V | S | Q | A | V | R | N | E | A | K | S | R | D | L | T | V | F | D | A | T | C | P | L | V | T | K | V | H | M | E | V | A | R | A | S | R | R | G | E | E | S | I | L | I |
Query Conservation |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
R | G | D | G | L | G | I | A | A | L | R | K | S | G | L | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
X | L | I | L | S | T | E | Q | N | P | V | V | A | A | R | A | R | K | L | K | I | P | V | L | H | G | I | D | R | K | D | L | A | L | K | Q | W | C | E | E | Q | G | I | A | P | E | R | V | L | Y | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
120 | . |
Predicted Secondary structure |   |
 |
|
Query SS confidence |   |
|
|
Query Sequence |   |
G | H |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
G | N |
Template Known Secondary structure |   |
 |
|
Template Predicted Secondary structure |   |
 |
|
Template SS confidence |   |
|
|
  |   |
109 | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|