Job Description P62623 Confidence 28.77% Date Thu Jan 5 12:07:44 GMT 2012 Rank 135 Aligned Residues 104 % Identity 12% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	A	I	L	I	F	S	A	H	G	V	S	Q	A	V	R	N	E	A	K	S	R	D	L	T	V	F	D	A	T	C	P	L	V	T	K	V	H	M	E	V	A	R	A	S	R	R	G	E	E	S	I	L	I	G	H	A	G	H	P	E	V	E	G	T	M	G	Q	Y	S	N	P	E	G	G	M	Y	L	V
Query Conservation
Alig confidence																														.	.	.	.	.																						.															.	.	.
Template Conservation																														.	.	.	.	.																						.															.	.	.
Template Sequence		C	N	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	.	.	.	.	.	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	.	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	.	.	.	E	C	A	K	W	L	I	L
Template Known Secondary structure			S								S													T	T					.	.	.	.	.				S											T	T						.	S		T	T	S							T	T	G	.	.	.	G	G		S
Template Predicted Secondary structure																														.	.	.	.	.																						.															.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.						.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.				480	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.								.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		E	S	P	D	D	V	W	K	L	.	.	.	.	.	.	.	T	V	K	N	E	E	K	L	S	F	M	T	Q	T	T	L	S	V	D	D	T	S	D	V
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R
Template Known Secondary structure				S																	S	S	S							S	S										T
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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