Job Description P62623 Confidence 100.00% Date Thu Jan 5 12:07:44 GMT 2012 Rank 2 Aligned Residues 280 % Identity 33% Template c3dnfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PDBTitle: structure of (e)-4-hydroxy-3-methyl-but-2-enyl diphosphate reductase,2 the terminal enzyme of the non-mevalonate pathway Resolution 1.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	I	L	L	A	N	P	R	G	F	C	A	G	V	D	R	A	I	S	I	V	E	N	A	L	A	I	Y	G	A	P	I	Y	V	R	H	E	V	V	H	N	R	Y	V	V	D	S	L	R	E	R	G	A	I	F	I	E	Q	I	S	E	V	P	D	G	A	I	L	I	F	S	A	H	G	V	S	Q	A	V
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		V	D	I	I	I	A	E	H	A	G	F	C	F	G	V	K	R	A	V	K	L	A	E	E	S	L	K	E	S	Q	G	K	V	Y	T	L	G	P	I	I	H	N	P	Q	E	V	N	R	L	K	N	L	G	V	F	P	S	.	Q	G	E	E	F	K	E	G	D	T	V	I	I	R	S	H	G	I	P	P	E	K
Template Known Secondary structure								T	T		S																T	T	T		S	S					S	S		S	S	S												T					.		S	S				T	T							T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	E	A	K	S	R	D	L	T	V	F	D	A	T	C	P	L	V	T	K	V	H	M	E	V	A	R	A	S	R	R	G	E	E	S	I	L	I	G	H	A	G	H	P	E	V	E	G	T	M	G	Q	Y	S	N	P	E	G	G	M	Y	L	V	E	S	P	D	D	V	W	K	L	T	V	K	N	E	E	K
Query Conservation
Alig confidence																																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		E	E	A	L	R	K	K	G	L	K	V	I	D	A	T	C	P	Y	V	K	A	V	H	E	A	V	C	Q	L	T	R	E	G	Y	F	V	V	L	V	G	E	K	N	H	P	E	V	I	G	T	L	G	Y	L	R	A	C	N	G	K	G	I	V	V	E	T	L	E	D	I	G	E	A	L	.	.	K	H	E	R
Template Known Secondary structure								T	T																								T	T							S		T	T														T	T							S	S	G	G	G	G	G	G	G	G	.	.	G	S	S
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	F	M	T	Q	T	T	L	S	V	D	D	T	S	D	V	I	D	A	L	R	K	R	F	P	K	I	V	G	P	R	K	D	D	I	C	Y	A	T	T	N	R	Q	E	A	V	R	A	L	A	E	Q	A	E	V	V	L	V	V	G	S	K	N	S	S	N	S	N	R	L	A	E	L	A	Q	R	M	G	K
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		V	G	I	V	A	Q	T	T	Q	N	E	E	F	F	K	E	V	V	G	E	I	A	L	W	V	K	E	V	.	.	K	V	I	N	T	I	C	N	A	T	S	L	R	Q	E	S	V	K	K	L	A	P	E	V	D	V	M	I	I	I	G	G	K	N	S	G	N	T	R	R	L	Y	Y	I	S	K	E	L	N	P
Template Known Secondary structure								T	T																	S	S			.	.								T													G	G	G	S	S						S		T	T																T
Template Predicted Secondary structure																														.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	F	L	I	D	D	A	K	D	I	Q	E	E	W	V	K	E	V	K	C	V	G	V	T	A	G	A	S	A	P	D	I	L	V	Q	N	V	V	A	R	L	Q	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	Y	H	I	E	T	A	E	E	L	Q	P	E	W	F	R	G	V	K	R	V	G	I	S	A	G	A	S	T	P	D	W	I	I	E	Q	V	K	S	R	I	Q	E	I
Template Known Secondary structure		T					S	S	G	G	G			G	G	G	G	T	T		S								T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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