Job Description P62623 Confidence 20.87% Date Thu Jan 5 12:07:44 GMT 2012 Rank 189 Aligned Residues 86 % Identity 15% Template c2xznU_ PDB info PDB header:ribosome Chain: U: PDB Molecule:ribosomal protein l7ae containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		S	D	V	I	D	A	L	R	K	R	F	P	K	I	V	G	P	R	K	D	D	I	C	Y	A	T	T	N	R	Q	E	A	V	R	A	L	A	E	Q	A	E	V	V	L	V	V	G	S	K	N	.	S	S	N	S	N	R	L	A	E	L	A	Q	R	M	G	K	R	A	F	L	I	D	D	A	K	D	I	Q	E
Query Conservation																																																				.
Alig confidence																.	.																			.	.															.																												.
Template Conservation																.	.																			.	.																																											.
Template Sequence		Q	Q	L	N	E	V	L	A	K	V	I	K	S	S	.	.	N	C	Q	D	A	I	S	K	G	L	H	E	V	L	R	T	I	E	.	.	A	K	Q	A	L	F	V	C	V	A	E	D	C	D	Q	G	N	Y	V	K	L	V	K	A	L	C	A	K	N	E	I	K	Y	V	S	V	P	K	R	A	S	L	.	G
Template Known Secondary structure													T	T	T	.	.	T	S	S	S					S										.	.		T			S						S	S			S	T	T												T	T							S		S				.
Template Predicted Secondary structure																.	.																			.	.																																											.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80
		254	.	.															.	.	.	260	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	V	K	C	V	G	V	T
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	L	G	H	F	T	A	N	A	K	G	E	I	K	K	V	K	G	C	S	S	L	A	I	R
Template Known Secondary structure					T		B				T	T	S					B									S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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