Return to main results Retrieve Phyre Job Id

Job DescriptionP62623
Confidence27.02%DateThu Jan 5 12:07:44 GMT 2012
Rank143Aligned Residues73
% Identity19%Templatec1gqqA_
PDB info PDB header:cell wall biosynthesisChain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: murc - crystal structure of the apo-enzyme from haemophilus2 influenzae
Resolution3.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50....... ..60.........70......... 80.........90...
Predicted Secondary structure 













.











..


Query SS confidence 






































.





















. .













Query Sequence  ISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFI. EQISEVPDGAILIFSAHGVSQA. . VRNEAKSRDLTVFD
Query Conservation 
  
          

 

 



  

  
   

  
.    

  
  







   ..        

 


Alig confidence 



















..
















.





















..













Template Conservation   
 

  
   
  
   
 ..        
   

              
 

 



         
      
  
Template Sequence  MSGIAEILLNEGYQISGSDI. . ADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQ
Template Known Secondary structure  T
S..

ST
S

GGGGTT
S
SSS
TT
T


Template Predicted Secondary structure 



..


























Template SS confidence 













































































   31........40.........50 .........60.........70.........80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions