Return to main results Retrieve Phyre Job Id

Job DescriptionP08395
Confidence99.91%DateThu Jan 5 11:01:27 GMT 2012
Rank13Aligned Residues151
% Identity19%Templated2f6ia1
SCOP infoClpP/crotonase ClpP/crotonase Clp protease, ClpP subunit
Resolution2.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   330.........340.........350.........360.........370.........380.........390.........400.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAAS
Query Conservation 

   
 
  
           
   
  
  
  













  

  
   
       



      


Alig confidence 











.......













.




























...













Template Conservation 

 
 
 
    .......
  
   
  
   .  
 
 
 





 
     
   
   ...   
   
 
 


Template Sequence  IIYLTDEINKKT. . . . . . . ADELISQLLYLDNI. NHNDIKIYINSPGGSINEGLAILDIFNYI. . . KSDIQTISFGLVAS
Template Known Secondary structure 
S
B
........

S


B
S...SS

Template Predicted Secondary structure 




.......

.









...






Template SS confidence 















































































   196...200....... ..210.........220. ........230.........240.........250 .........260....
 
   410.........420. ........430.........440.........450.........460.........470.........480.......
Predicted Secondary structure 


..























Query SS confidence 











. .

































































Query Sequence  GGYWISTPANYI. . VANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKR
Query Conservation 


 

  

 
.. 
 
 
 





            
 

    
  
           
              
  
Alig confidence 











..








.....................................



















Template Conservation      
  

 

 
   
 
   ..................................... 
           
      
Template Sequence  MASVILASGKKGKRKSLPNCRIM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IHQPLGNAFQTKEILYLKKL
Template Known Secondary structure  TS
TT

TT
.....................................SS
TT
S


Template Predicted Secondary structure 









.....................................

Template SS confidence 















































































   265....270.........280....... ..290.........300.......
 
   488.490.........500.........510.. .......520........
Predicted Secondary structure 






.








Query SS confidence 
























.















Query Sequence  FITLVADARHSTPEQIDKIAQGHVW. TGQDAKANGLVDSLGD
Query Conservation 
   

  
      
   
 


 .

  
   



 

 
Alig confidence 
























.















Template Conservation       
   
     
          

 

   



 

 
Template Sequence  LYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIE
Template Known Secondary structure 


TT

TS
S

Template Predicted Secondary structure 













Template SS confidence 









































   316...320.........330.........340.........350.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions